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PMID: 1729613 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, Non-P.H.S. Research Support, U.S. Gov't, P.H.S.

Factors involved in specific transcription by mammalian RNA polymerase II: purification and analysis of transcription factor IIA and identification of transcription factor IIJ.

Molecular and cellular biology ·Vol. 12 ·No. 1 ·1992-01-00 ·Pages 413-21

Cortes P, Flores O, Reinberg D

Abstract

The previously described transcription factor IIA (TFIIA) protein fraction was separated into two factors that affect transcription, TFIIA and TFIIJ. TFIIA was found to have a stimulatory effect, and TFIIJ was found to be required for transcription. The requirement of TFIIJ was observed when bacterially produced purified human or yeast (Saccharomyces cerevisiae) TATA-binding protein (TBP) was used in lieu of the endogenous HeLa cell TFIID complex, suggesting that TFIIJ may be part of the TFIID complex. The stimulatory activity of TFIIA was found also to be dependent on the source of the TBP. Transcription reactions reconstituted with TFIID were stimulated by TFIIA; however, when human or yeast TBP was used instead of TFIID, TFIIA had no effect. TFIIA was found to interact with the TBP and was extensively purified by the use of affinity chromatography on columns containing immobilized recombinant yeast TBP. TFIIA is a heterotrimer composed of polypeptides of 34, 19, and 14 kDa. These three polypeptides were required to isolate, by using the gel mobility shift assay, a stable complex between TBP and the TATA box sequence.

MeSH Terms
Chromatography DNA-Binding Proteins/isolation & purification,metabolism Deoxyribonuclease I/metabolism Electrophoresis, Polyacrylamide Gel HeLa Cells Humans RNA Polymerase II/metabolism TATA Box Transcription Factor TFIIA Transcription Factors/isolation & purification,metabolism Transcription, Genetic
Chemicals
DNA-Binding Proteins Transcription Factor TFIIA Transcription Factors RNA Polymerase II Deoxyribonuclease I
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Cortes P
Department of Biochemistry, Robert Wood Johnson Medical School, University of Medicine and Dentistry of New Jersey, Piscataway 08854-5635.
Flores O
Reinberg D
References (42)
42 references, click to expand
  1. The initiator directs the assembly of a transcription factor IID-dependent transcription complex.
    Proc Natl Acad Sci U S A. 1991 Sep 15;88(18):8052-6 PMID: 1896450
  2. Affinity purification of transcription factor IIA from HeLa cell nuclear extracts.
    EMBO J. 1991 Aug;10(8):2305-10 PMID: 2065666
  3. Factors involved in specific transcription by mammalian RNA polymerase II. Purification and functional analysis of general transcription factor IIE.
    J Biol Chem. 1991 May 15;266(14):9304-8 PMID: 2026628
  4. Cloned yeast and mammalian transcription factor TFIID gene products support basal but not activated metallothionein gene transcription.
    Proc Natl Acad Sci U S A. 1990 Dec;87(23):9168-72 PMID: 2251259
  5. Factors involved in specific transcription by mammalian RNA polymerase II: identification of general transcription factor TFIIG.
    Proc Natl Acad Sci U S A. 1990 Dec;87(23):9158-62 PMID: 2251257
  6. Factors involved in specific transcription by mammalian RNA polymerase II: role of transcription factors IIA, IID, and IIB during formation of a transcription-competent complex.
    Mol Cell Biol. 1990 Dec;10(12):6335-47 PMID: 2247058
  7. Cloning of the Schizosaccharomyces pombe TFIID gene reveals a strong conservation of functional domains present in Saccharomyces cerevisiae TFIID.
    Genes Dev. 1990 Jul;4(7):1141-8 PMID: 2210373
  8. Physical analysis of transcription preinitiation complex assembly on a class II gene promoter.
    Science. 1988 Sep 9;241(4871):1335-8 PMID: 3413495
  9. Isolation of the gene encoding the yeast TATA binding protein TFIID: a gene identical to the SPT15 suppressor of Ty element insertions.
    Cell. 1989 Sep 22;58(6):1173-81 PMID: 2550146
  10. Factors involved in specific transcription by mammalian RNA polymerase II. Purification and functional analysis of initiation factors IIB and IIE.
    J Biol Chem. 1987 Mar 5;262(7):3310-21 PMID: 3029109
  11. I kappa B: a specific inhibitor of the NF-kappa B transcription factor.
    Science. 1988 Oct 28;242(4878):540-6 PMID: 3140380
  12. Helix-turn-helix, zinc-finger, and leucine-zipper motifs for eukaryotic transcriptional regulatory proteins.
    Trends Biochem Sci. 1989 Apr;14(4):137-40 PMID: 2499084
  13. Identification of a yeast protein homologous in function to the mammalian general transcription factor, TFIIA.
    EMBO J. 1989 Nov;8(11):3379-82 PMID: 2684641
  14. Cloning and structure of a yeast gene encoding a general transcription initiation factor TFIID that binds to the TATA box.
    Nature. 1989 Sep 28;341(6240):299-303 PMID: 2677740
  15. Initiation of transcription by RNA polymerase II.
    Biochim Biophys Acta. 1989 Sep 21;1009(1):1-10 PMID: 2675975
  16. Promoter specificity and modulation of RNA polymerase II transcription.
    FASEB J. 1989 Apr;3(6):1723-33 PMID: 2649403
  17. Five intermediate complexes in transcription initiation by RNA polymerase II.
    Cell. 1989 Feb 24;56(4):549-61 PMID: 2917366
  18. Proximal and distal domains that control in vitro transcription of the adenovirus IVa2 gene.
    Proc Natl Acad Sci U S A. 1984 Oct;81(20):6290-4 PMID: 6593702
  19. Factors involved in specific transcription in mammalian RNA polymerase II. Functional analysis of initiation factors IIA and IID and identification of a new factor operating at sequences downstream of the initiation site.
    J Biol Chem. 1987 Mar 5;262(7):3322-30 PMID: 3818643
  20. Purification and characterization of a specific RNA polymerase II transcription factor.
    J Biol Chem. 1986 Feb 15;261(5):2003-13 PMID: 3944124
  21. Interaction of a gene-specific transcription factor with the adenovirus major late promoter upstream of the TATA box region.
    Cell. 1985 Nov;43(1):165-75 PMID: 4075392
  22. NF-kappa B, KBF1, dorsal, and related matters.
    Cell. 1990 Sep 7;62(5):841-3 PMID: 2203533
  23. Striking conservation of TFIID in Schizosaccharomyces pombe and Saccharomyces cerevisiae.
    Nature. 1990 Jul 19;346(6281):291-4 PMID: 2197558
  24. Functional domains and upstream activation properties of cloned human TATA binding protein.
    Science. 1990 Jun 29;248(4963):1625-30 PMID: 2363050
  25. Commitment and activation at pol II promoters: a tail of protein-protein interactions.
    Cell. 1990 Jun 29;61(7):1161-4 PMID: 2194664
  26. The protein Id: a negative regulator of helix-loop-helix DNA binding proteins.
    Cell. 1990 Apr 6;61(1):49-59 PMID: 2156629
  27. Direct and selective binding of an acidic transcriptional activation domain to the TATA-box factor TFIID.
    Nature. 1990 Jun 28;345(6278):783-6 PMID: 2193231
  28. Mechanism of transcriptional activation by Sp1: evidence for coactivators.
    Cell. 1990 Jun 29;61(7):1187-97 PMID: 2194667
  29. Cloning of a transcriptionally active human TATA binding factor.
    Science. 1990 Jun 29;248(4963):1646-50 PMID: 2194289
  30. Transcriptional regulation by dimerization: two sides to an incestuous relationship.
    Cell. 1990 Apr 6;61(1):9-11 PMID: 2180585
  31. Transcription initiation complexes and upstream activation with RNA polymerase II lacking the C-terminal domain of the largest subunit.
    Mol Cell Biol. 1990 Oct;10(10):5562-4 PMID: 2398901
  32. Highly conserved core domain and unique N terminus with presumptive regulatory motifs in a human TATA factor (TFIID).
    Nature. 1990 Jul 26;346(6282):387-90 PMID: 2374612
  33. Transcription factor IIA of wheat and human function similarly with plant and animal viral promoters.
    Nucleic Acids Res. 1990 Jun 25;18(12):3611-20 PMID: 2362810
  34. Separation and characterization of factors mediating accurate transcription by RNA polymerase II.
    J Biol Chem. 1982 Dec 10;257(23):14419-27 PMID: 7142220
  35. Formation of stable preinitiation complexes between eukaryotic class B transcription factors and promoter sequences.
    Nature. 1983 Feb 24;301(5902):680-6 PMID: 6828151
  36. Elution of proteins from sodium dodecyl sulfate-polyacrylamide gels, removal of sodium dodecyl sulfate, and renaturation of enzymatic activity: results with sigma subunit of Escherichia coli RNA polymerase, wheat germ DNA topoisomerase, and other enzymes.
    Anal Biochem. 1980 Nov 15;109(1):76-86 PMID: 6258458
  37. Interactions between RNA polymerase II, factors, and template leading to accurate transcription.
    J Biol Chem. 1984 Feb 25;259(4):2509-16 PMID: 6698978
  38. The T/E1A-binding domain of the retinoblastoma product can interact selectively with a sequence-specific DNA-binding protein.
    Cell. 1991 Jun 14;65(6):1073-82 PMID: 1828394
  39. The retinoblastoma protein copurifies with E2F-I, an E1A-regulated inhibitor of the transcription factor E2F.
    Cell. 1991 Jun 14;65(6):1063-72 PMID: 1828393
  40. The E2F transcription factor is a cellular target for the RB protein.
    Cell. 1991 Jun 14;65(6):1053-61 PMID: 1828392
  41. Direct interaction between adenovirus E1A protein and the TATA box binding transcription factor IID.
    Proc Natl Acad Sci U S A. 1991 Jun 15;88(12):5124-8 PMID: 1828892
  42. Isolation of coactivators associated with the TATA-binding protein that mediate transcriptional activation.
    Cell. 1991 Aug 9;66(3):563-76 PMID: 1907890
Article Info
Journal
Molecular and cellular biology
Abbr.
Mol Cell Biol
ISSN
0270-7306
Published
1992-01-00
Pages
413-21
Language
English
Region
United States
NLM ID
8109087
PMCID
PMC364136
Subset
IM
Grants
NIGMS NIH HHS · GM 37110 · United States
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