Abstract
Dynamic imaging of proteins in live cells is routinely performed by using genetically encoded reporters, an approach that cannot be extended to other classes of biomolecules such as glycans and lipids. Here, we report a Cu-free variant of click chemistry that can label these biomolecules rapidly and selectively in living systems, overcoming the intrinsic toxicity of the canonical Cu-catalyzed reaction. The critical reagent, a substituted cyclooctyne, possesses ring strain and electron-withdrawing fluorine substituents that together promote the [3 + 2] dipolar cycloaddition with azides installed metabolically into biomolecules. This Cu-free click reaction possesses comparable kinetics to the Cu-catalyzed reaction and proceeds within minutes on live cells with no apparent toxicity. With this technique, we studied the dynamics of glycan trafficking and identified a population of sialoglycoconjugates with unexpectedly rapid internalization kinetics.
MeSH Terms
Animals
Biological Transport
CHO Cells
Catalysis
Cell Survival
Chemistry, Organic/methods
Copper/metabolism
Cricetinae
Cricetulus
Endocytosis
Humans
Hydrocarbons, Cyclic/chemical synthesis,chemistry
Hydrocarbons, Fluorinated/chemical synthesis,chemistry
Imaging, Three-Dimensional/methods
Jurkat Cells
Kinetics
Polysaccharides/metabolism
Proteins/metabolism
Time Factors
Chemicals
Hydrocarbons, Cyclic
Hydrocarbons, Fluorinated
Polysaccharides
Proteins
Copper
Authors & Affiliations
9 authors, click to expand affiliations / ORCID
Baskin Jeremy M
Department of Chemistry, and Howard Hughes Medical Institute, University of California, Berkeley, CA 94720, USA.
Prescher Jennifer A
Laughlin Scott T
Agard Nicholas J
Chang Pamela V
Miller Isaac A
Lo Anderson
Codelli Julian A
Bertozzi Carolyn R
References (28)
28 references, click to expand
-
Peptidotriazoles on solid phase: [1,2,3]-triazoles by regiospecific copper(i)-catalyzed 1,3-dipolar cycloadditions of terminal alkynes to azides.
J Org Chem. 2002 May 3;67(9):3057-64
PMID: 11975567
-
Site-specific labeling of proteins with small molecules in live cells.
Curr Opin Biotechnol. 2005 Feb;16(1):35-40
PMID: 15722013
-
Introducing genetically encoded aldehydes into proteins.
Nat Chem Biol. 2007 Jun;3(6):321-2
PMID: 17450134
-
Intracellular trafficking of cell surface sialoglycoconjugates.
J Biol Chem. 1988 Nov 5;263(31):16316-26
PMID: 3182795
-
Fluorescence visualization of newly synthesized proteins in mammalian cells.
Angew Chem Int Ed Engl. 2006 Nov 13;45(44):7364-7
PMID: 17036290
-
The fluorescent toolbox for assessing protein location and function.
Science. 2006 Apr 14;312(5771):217-24
PMID: 16614209
-
Fluorine in medicinal chemistry.
Chembiochem. 2004 May 3;5(5):637-43
PMID: 15122635
-
A stepwise huisgen cycloaddition process: copper(I)-catalyzed regioselective "ligation" of azides and terminal alkynes.
Angew Chem Int Ed Engl. 2002 Jul 15;41(14):2596-9
PMID: 12203546
-
An expanded eukaryotic genetic code.
Science. 2003 Aug 15;301(5635):964-7
PMID: 12920298
-
Incorporation of azides into recombinant proteins for chemoselective modification by the Staudinger ligation.
Proc Natl Acad Sci U S A. 2002 Jan 8;99(1):19-24
PMID: 11752401
-
Activity-based protein profiling in vivo using a copper(i)-catalyzed azide-alkyne [3 + 2] cycloaddition.
J Am Chem Soc. 2003 Apr 23;125(16):4686-7
PMID: 12696868
-
A chemical approach for identifying O-GlcNAc-modified proteins in cells.
Proc Natl Acad Sci U S A. 2003 Aug 5;100(16):9116-21
PMID: 12874386
-
Chemical remodelling of cell surfaces in living animals.
Nature. 2004 Aug 19;430(7002):873-7
PMID: 15318217
-
A strain-promoted [3 + 2] azide-alkyne cycloaddition for covalent modification of biomolecules in living systems.
J Am Chem Soc. 2004 Nov 24;126(46):15046-7
PMID: 15547999
-
The sequential transfer of internalized, cell surface sialoglycoconjugates through the lysosomes and Golgi complex in HeLa cells.
J Biol Chem. 1986 Sep 5;261(25):11896-905
PMID: 3745170
-
Chemical technologies for probing glycans.
Cell. 2006 Sep 8;126(5):851-4
PMID: 16959565
-
Mechanism of the ligand-free CuI-catalyzed azide-alkyne cycloaddition reaction.
Angew Chem Int Ed Engl. 2005 Apr 8;44(15):2210-5
PMID: 15693051
-
Mechanistic investigation of the staudinger ligation.
J Am Chem Soc. 2005 Mar 2;127(8):2686-95
PMID: 15725026
-
Alkynyl sugar analogs for the labeling and visualization of glycoconjugates in cells.
Proc Natl Acad Sci U S A. 2007 Feb 20;104(8):2614-9
PMID: 17296930
-
Investigating cellular metabolism of synthetic azidosugars with the Staudinger ligation.
J Am Chem Soc. 2002 Dec 18;124(50):14893-902
PMID: 12475330
-
Sorting of membrane components from endosomes and subsequent recycling to the cell surface occurs by a bulk flow process.
J Cell Biol. 1993 Jun;121(6):1257-69
PMID: 8509447
-
Chemistry in living systems.
Nat Chem Biol. 2005 Jun;1(1):13-21
PMID: 16407987
-
Profiling enzyme activities in vivo using click chemistry methods.
Chem Biol. 2004 Apr;11(4):535-46
PMID: 15123248
-
A comparative study of bioorthogonal reactions with azides.
ACS Chem Biol. 2006 Nov 21;1(10):644-8
PMID: 17175580
-
Polytriazoles as copper(I)-stabilizing ligands in catalysis.
Org Lett. 2004 Aug 19;6(17):2853-5
PMID: 15330631
-
Specific covalent labeling of recombinant protein molecules inside live cells.
Science. 1998 Jul 10;281(5374):269-72
PMID: 9657724
-
Glycoprotein recycling to the galactosyltransferase compartment of the Golgi complex.
J Biol Chem. 1993 May 5;268(13):9302-10
PMID: 8486626
-
Cell surface engineering by a modified Staudinger reaction.
Science. 2000 Mar 17;287(5460):2007-10
PMID: 10720325