Home LiteratureArticle Details
PMID: 1991717 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

The ompH gene of Yersinia enterocolitica: cloning, sequencing, expression, and comparison with known enterobacterial ompH sequences.

Journal of bacteriology ·Vol. 173 ·No. 3 ·1991-02-00 ·Pages 1223-9

Hirvas L, Koski P, Vaara M

Abstract

We have recently described a previously uncharacterized outer membrane protein of Salmonella typhimurium and Escherichia coli and cloned and sequenced the corresponding gene, the ompH gene, of S. typhimurium (P. Koski, M. Rhen, J. Kantele, and M. Vaara, J. Biol. Chem. 264:18973-18980, 1989). We report here the cloning, sequencing, and expression of the corresponding gene of Yersinia enterocolitica. It is significantly homologous to the ompH genes of E. coli and S. typhimurium (homology percentages, 65 and 64%, respectively), has a promoter region strongly homologous to the E. coli 17-bp class consensus promoter, and encodes a protein consisting of 165 amino acids (22 of which form the signal sequence). The plasmid-borne Y. enterocolitica ompH was found to be expressed both in the E. coli host and in minicells. The isolated outer membrane of Y. enterocolitica was shown to contain OmpH. The homology of the Y. enterocolitica OmpH protein is 66% with E. coli OmpH and 64% with S. typhimurium OmpH. All OmpH proteins have almost identical hydrophobic profiles, charge distributions, and predicted secondary structures. Because yersiniae are considered rather distant relatives of E. coli and S. typhimurium in the Enterobacteriaceae family, these results might indicate that most or all strains of the family Enterobacteriaceae have OmpH proteins remarkably homologous to those now sequenced.

MeSH Terms
Amino Acid Sequence Bacterial Outer Membrane Proteins/genetics Base Sequence Blotting, Southern Cloning, Molecular Consensus Sequence Escherichia coli/genetics Gene Expression Regulation, Bacterial Genes, Bacterial Molecular Sequence Data Promoter Regions, Genetic Restriction Mapping Salmonella typhimurium/genetics Sequence Homology, Nucleic Acid Yersinia enterocolitica/genetics
Chemicals
Bacterial Outer Membrane Proteins ompH protein, bacteria
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Hirvas L
Department of Bacteriology and Immunology, University of Helsinki, Finland.
Koski P
Vaara M
References (37)
37 references, click to expand
  1. High resolution acrylamide gel electrophoresis of histones.
    Arch Biochem Biophys. 1969 Mar;130(1):337-46 PMID: 5778650
  2. Complete sequence of the ompH gene encoding the 16-kDa cationic outer membrane protein of Salmonella typhimurium.
    Gene. 1990 Mar 30;88(1):117-20 PMID: 2187745
  3. DNA sequencing with chain-terminating inhibitors.
    Proc Natl Acad Sci U S A. 1977 Dec;74(12):5463-7 PMID: 271968
  4. Characterization and clinical identification of Enterobacteriaceae by DNA hybridization.
    Prog Clin Pathol. 1978;7:71-117 PMID: 345354
  5. Evolution of ribosomal proteins in Enterobacteriaceae.
    J Bacteriol. 1978 Mar;133(3):1089-95 PMID: 346556
  6. Prediction of chain turns in globular proteins on a hydrophobic basis.
    Nature. 1978 Apr 13;272(5654):586-90 PMID: 643051
  7. Empirical predictions of protein conformation.
    Annu Rev Biochem. 1978;47:251-76 PMID: 354496
  8. A lipopolysaccharide-binding cell-surface protein from Salmonella minnesota. Isolation, partial characterization and occurrence in different Enterobacteriaceae.
    Eur J Biochem. 1979 Jul;98(1):27-38 PMID: 111933
  9. Cross-reactivity of major outer membrane proteins of Enterobacteriaceae, studied by crossed immunoelectrophoresis.
    J Bacteriol. 1980 Jul;143(1):328-37 PMID: 6995435
  10. Nucleotide sequence of the gene ompA coding the outer membrane protein II of Escherichia coli K-12.
    Nucleic Acids Res. 1980 Jul 11;8(13):3011-27 PMID: 6253901
  11. Comparison of the lipoprotein gene among the Enterobacteriaceae. DNA sequence of Erwinia amylovora lipoprotein gene.
    J Biol Chem. 1981 Mar 10;256(5):2194-8 PMID: 6257705
  12. The nucleotide sequence coding for major outer membrane protein OmpA of Shigella dysenteriae.
    Nucleic Acids Res. 1982 Apr 10;10(7):2367-78 PMID: 6283478
  13. A simple method for displaying the hydropathic character of a protein.
    J Mol Biol. 1982 May 5;157(1):105-32 PMID: 7108955
  14. Cloning of the regulatory locus ompB of Salmonella typhimurium LT-2. II. Identification of the envZ gene product, a protein involved in the expression of the porin proteins.
    Mol Gen Genet. 1982;188(2):190-4 PMID: 6296627
  15. Comparison of the lipoprotein gene among the enterobacteriaceae. DNA sequence of Morganella morganii lipoprotein gene and its expression in Escherichia coli.
    J Biol Chem. 1983 Jul 10;258(13):8139-45 PMID: 6305973
  16. Cloning and molecular characterization of the ompA gene from Salmonella typhimurium.
    Eur J Biochem. 1983 Aug 15;134(3):497-502 PMID: 6349993
  17. ompA gene in the detection of Escherichia coli and other Enterobacteriaceae by nucleic acid sandwich hybridization.
    J Clin Microbiol. 1983 Jul;18(1):92-100 PMID: 6350355
  18. Molecular characterization of the gene coding for major outer membrane protein OmpA from Enterobacter aerogenes.
    Eur J Biochem. 1983 Dec 15;137(3):495-500 PMID: 6363059
  19. DNA sequence analysis of the Serratia marcescens ompA gene: implications for the organisation of an enterobacterial outer membrane protein.
    Mol Gen Genet. 1984;195(1-2):321-8 PMID: 6092858
  20. A novel virulence-associated cell surface structure composed of 47-kd protein subunits in Yersinia enterocolitica.
    EMBO J. 1985 Apr;4(4):1013-8 PMID: 4018036
  21. Dideoxy sequencing method using denatured plasmid templates.
    Anal Biochem. 1986 Feb 1;152(2):232-8 PMID: 3516005
  22. The DNA sequence of the structural gene of gonococcal protein III and the flanking region containing a repetitive sequence. Homology of protein III with enterobacterial OmpA proteins.
    J Exp Med. 1987 Feb 1;165(2):471-82 PMID: 3102671
  23. A comparative study on the phoE genes of three enterobacterial species. Implications for structure-function relationships in a pore-forming protein of the outer membrane.
    Eur J Biochem. 1987 Apr 15;164(2):469-75 PMID: 3032618
  24. Purification and characterization of the 17 K protein, a DNA-binding protein from Escherichia coli.
    Biochim Biophys Acta. 1987 Jul 24;914(1):49-54 PMID: 3300779
  25. Practical aspects of preparing phage and plasmid DNA: growth, maintenance, and storage of bacteria and bacteriophage.
    Methods Enzymol. 1987;152:145-70 PMID: 2958676
  26. Nick translation.
    Methods Enzymol. 1987;152:91-4 PMID: 3657594
  27. The nucleotide sequence of the Salmonella typhi ompC porin gene.
    Nucleic Acids Res. 1988 Aug 11;16(15):7721 PMID: 3412902
  28. Cloning and sequencing of the gene for the DNA-binding 17K protein of Escherichia coli.
    Gene. 1988 Jul 15;67(1):117-24 PMID: 2843433
  29. Identity of the 17-kilodalton protein, a DNA-binding protein from Escherichia coli, and the firA gene product.
    J Bacteriol. 1988 Dec;170(12):5916-8 PMID: 3056922
  30. Primary structure of the porin protein of Haemophilus influenzae type b determined by nucleotide sequence analysis.
    Infect Immun. 1989 Apr;57(4):1100-7 PMID: 2538396
  31. Escherichia coli promoters. I. Consensus as it relates to spacing class, specificity, repeat substructure, and three-dimensional organization.
    J Biol Chem. 1989 Apr 5;264(10):5522-30 PMID: 2647720
  32. Pseudomonas aeruginosa outer membrane protein F: structural role and relationship to the Escherichia coli OmpA protein.
    J Bacteriol. 1989 Jun;171(6):3304-9 PMID: 2498289
  33. Sequence of the structural gene (rmpM) for the class 4 outer membrane protein of Neisseria meningitidis, homology of the protein to gonococcal protein III and Escherichia coli OmpA, and construction of meningococcal strains that lack class 4 protein.
    Infect Immun. 1989 Jul;57(7):2066-71 PMID: 2499543
  34. Isolation, cloning, and primary structure of a cationic 16-kDa outer membrane protein of Salmonella typhimurium.
    J Biol Chem. 1989 Nov 15;264(32):18973-80 PMID: 2681205
  35. Evolution of aromatic amino acid biosynthesis and application to the fine-tuned phylogenetic positioning of enteric bacteria.
    J Bacteriol. 1990 Feb;172(2):1051-61 PMID: 2298692
  36. Bacterial 'histone-like protein I' (HLP-I) is an outer membrane constituent?
    FEBS Lett. 1990 Mar 12;262(1):123-6 PMID: 2318304
  37. Cleavage of structural proteins during the assembly of the head of bacteriophage T4.
    Nature. 1970 Aug 15;227(5259):680-5 PMID: 5432063
Article Info
Journal
Journal of bacteriology
Abbr.
J Bacteriol
ISSN
0021-9193
Published
1991-02-00
Pages
1223-9
Language
English
Region
United States
NLM ID
2985120R
PMCID
PMC207246
Subset
IM
Databases
GENBANK
1900 34854, M34854, M57549, M57550, M63694, S70331, S70358, S70359, S70363, S70365, S70370
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]