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PMID: 21344950 Published · ppublish English Journal Article Research Support, N.I.H., Extramural

Phosphatidylinositol 4,5-bisphosphate alters synaptotagmin 1 membrane docking and drives opposing bilayers closer together.

Biochemistry ·Vol. 50 ·No. 13 ·2011-04-05 ·Pages 2633-41

Kuo W, Herrick DZ, Cafiso DS

Abstract

Synaptotagmin 1 (syt1) is a synaptic vesicle-anchored membrane protein that acts as the calcium sensor for the synchronous component of neuronal exocytosis. Using site-directed spin labeling, the position and membrane interactions of a fragment of syt1 containing its two C2 domains (syt1C2AB) were assessed in bilayers containing phosphatidylcholine (PC), phosphatidylserine (PS), and phosphatidylinositol 4,5-bisphosphate (PIP(2)). Addition of 1 mol % PIP(2) to a lipid mixture of PC and PS results in a deeper membrane penetration of the C2A domain and alters the orientation of the C2B domain so that the polybasic face of C2B comes into the proximity of the bilayer interface. The C2B domain is found to contact the membrane interface in two regions, the Ca(2+)-binding loops and a region opposite the Ca(2+)-binding loops. This suggests that syt1C2AB is configured to bridge two bilayers and is consistent with a model generated previously for syt1C2AB bound to membranes of PC and PS. Point-to-plane depth restraints, obtained by progressive power saturation, and interdomain distance restraints, obtained by double electron-electron resonance, were obtained in the presence of PIP(2) and used in a simulated annealing routine to dock syt1C2AB to two membrane interfaces. The results yield an average structure different from what is found in the absence of PIP(2) and indicate that bilayer-bilayer spacing is decreased in the presence of PIP(2). The results indicate that PIP(2), which is necessary for bilayer fusion, alters C2 domain orientation, enhances syt1-membrane electrostatic interactions, and acts to drive vesicle and cytoplasmic membrane surfaces closer together.

MeSH Terms
Animals Computer Simulation Electron Spin Resonance Spectroscopy Kinetics Lipid Bilayers/chemistry,metabolism Liposomes/chemistry,metabolism Membrane Fusion Models, Biological Mutagenesis, Site-Directed Mutant Proteins/chemistry,metabolism Peptide Fragments/chemistry,genetics,metabolism Phosphatidylinositol 4,5-Diphosphate/metabolism Protein Conformation Protein Interaction Domains and Motifs Rats Spin Labels Surface Properties Synaptotagmin I/chemistry,genetics,metabolism
Chemicals
Lipid Bilayers Liposomes Mutant Proteins Peptide Fragments Phosphatidylinositol 4,5-Diphosphate Spin Labels Synaptotagmin I Syt1 protein, rat
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Kuo Weiwei
Department of Chemistry and Center for Membrane Biology, University of Virginia, Charlottesville, Virginia 22904-4319, United States.
Herrick Dawn Z
Cafiso David S
References (44)
44 references, click to expand
  1. SNAREs--engines for membrane fusion.
    Nat Rev Mol Cell Biol. 2006 Sep;7(9):631-43 PMID: 16912714
  2. Structural and mechanistic insights into the association of PKCalpha-C2 domain to PtdIns(4,5)P2.
    Proc Natl Acad Sci U S A. 2009 Apr 21;106(16):6603-7 PMID: 19346474
  3. Synaptic vesicle fusion.
    Nat Struct Mol Biol. 2008 Jul;15(7):665-74 PMID: 18618940
  4. A quaternary SNARE-synaptotagmin-Ca2+-phospholipid complex in neurotransmitter release.
    J Mol Biol. 2007 Mar 30;367(3):848-63 PMID: 17320903
  5. How does synaptotagmin trigger neurotransmitter release?
    Annu Rev Biochem. 2008;77:615-41 PMID: 18275379
  6. Dynamic Ca2+-dependent stimulation of vesicle fusion by membrane-anchored synaptotagmin 1.
    Science. 2010 May 7;328(5979):760-3 PMID: 20448186
  7. The synaptic vesicle cycle.
    Annu Rev Neurosci. 2004;27:509-47 PMID: 15217342
  8. Molecular anatomy of a trafficking organelle.
    Cell. 2006 Nov 17;127(4):831-46 PMID: 17110340
  9. PIP2 increases the speed of response of synaptotagmin and steers its membrane-penetration activity toward the plasma membrane.
    Nat Struct Mol Biol. 2004 Jan;11(1):36-44 PMID: 14718921
  10. Conflicting views on the membrane fusion machinery and the fusion pore.
    Annu Rev Cell Dev Biol. 2009;25:513-37 PMID: 19575641
  11. Synaptotagmin 1 and SNAREs form a complex that is structurally heterogeneous.
    J Mol Biol. 2011 Jan 21;405(3):696-706 PMID: 21087613
  12. PIP(2) and proteins: interactions, organization, and information flow.
    Annu Rev Biophys Biomol Struct. 2002;31:151-75 PMID: 11988466
  13. Single-molecule FRET-derived model of the synaptotagmin 1-SNARE fusion complex.
    Nat Struct Mol Biol. 2010 Mar;17(3):318-24 PMID: 20173763
  14. Molecular tuning of ion binding to calcium signaling proteins.
    Q Rev Biophys. 1994 Aug;27(3):219-90 PMID: 7899550
  15. CAPS drives trans-SNARE complex formation and membrane fusion through syntaxin interactions.
    Proc Natl Acad Sci U S A. 2009 Oct 13;106(41):17308-13 PMID: 19805029
  16. Three-dimensional structure of the synaptotagmin 1 C2B-domain: synaptotagmin 1 as a phospholipid binding machine.
    Neuron. 2001 Dec 20;32(6):1057-69 PMID: 11754837
  17. PI(4,5)P(2) regulation of surface membrane traffic.
    Curr Opin Cell Biol. 2001 Aug;13(4):493-9 PMID: 11454457
  18. The Janus-faced nature of the C(2)B domain is fundamental for synaptotagmin-1 function.
    Nat Struct Mol Biol. 2008 Nov;15(11):1160-8 PMID: 18953334
  19. Membrane curvature in synaptic vesicle fusion and beyond.
    Cell. 2010 Mar 5;140(5):601-5 PMID: 20211126
  20. Position of synaptotagmin I at the membrane interface: cooperative interactions of tandem C2 domains.
    Biochemistry. 2006 Aug 15;45(32):9668-74 PMID: 16893168
  21. Stages of regulated exocytosis.
    Trends Cell Biol. 1997 Jul;7(7):271-6 PMID: 17708959
  22. Phosphatidylinositol 4,5-bisphosphate regulates SNARE-dependent membrane fusion.
    J Cell Biol. 2008 Jul 28;182(2):355-66 PMID: 18644890
  23. Cross-linking of phospholipid membranes is a conserved property of calcium-sensitive synaptotagmins.
    J Mol Biol. 2008 Jun 27;380(1):42-50 PMID: 18508081
  24. Electrostatic control of the membrane targeting of C2 domains.
    Mol Cell. 2002 Jan;9(1):145-54 PMID: 11804593
  25. Evidence that electrostatic interactions between vesicle-associated membrane protein 2 and acidic phospholipids may modulate the fusion of transport vesicles with the plasma membrane.
    Mol Biol Cell. 2009 Dec;20(23):4910-9 PMID: 19812247
  26. The C2 domains of synaptotagmin--partners in exocytosis.
    Trends Biochem Sci. 2004 Mar;29(3):143-51 PMID: 15003272
  27. Synaptotagmin activates membrane fusion through a Ca2+-dependent trans interaction with phospholipids.
    Nat Struct Mol Biol. 2007 Oct;14(10):904-11 PMID: 17891149
  28. Close membrane-membrane proximity induced by Ca(2+)-dependent multivalent binding of synaptotagmin-1 to phospholipids.
    Nat Struct Mol Biol. 2006 Mar;13(3):209-17 PMID: 16491093
  29. Ultracentrifugation technique for measuring the binding of peptides and proteins to sucrose-loaded phospholipid vesicles.
    Methods Mol Biol. 1998;84:267-81 PMID: 9666456
  30. The calcium-dependent and calcium-independent membrane binding of synaptotagmin 1: two modes of C2B binding.
    J Mol Biol. 2009 Mar 27;387(2):284-94 PMID: 19302798
  31. Electrostatics of nanosystems: application to microtubules and the ribosome.
    Proc Natl Acad Sci U S A. 2001 Aug 28;98(18):10037-41 PMID: 11517324
  32. Intracellular membrane fusion.
    Adv Second Messenger Phosphoprotein Res. 1994;29:81-96 PMID: 7848733
  33. Effect of PIP2 binding on the membrane docking geometry of PKC alpha C2 domain: an EPR site-directed spin-labeling and relaxation study.
    Biochemistry. 2008 Aug 12;47(32):8301-16 PMID: 18610985
  34. Membrane-bound orientation and position of the synaptotagmin I C2A domain by site-directed spin labeling.
    Biochemistry. 2003 Jan 14;42(1):96-105 PMID: 12515543
  35. Solution and membrane-bound conformations of the tandem C2A and C2B domains of synaptotagmin 1: Evidence for bilayer bridging.
    J Mol Biol. 2009 Jul 31;390(5):913-23 PMID: 19501597
  36. Plasma membrane phosphoinositide organization by protein electrostatics.
    Nature. 2005 Dec 1;438(7068):605-11 PMID: 16319880
  37. Unraveling the mechanisms of synaptotagmin and SNARE function in neurotransmitter release.
    Trends Cell Biol. 2006 Jul;16(7):339-50 PMID: 16698267
  38. Lateral sequestration of phosphatidylinositol 4,5-bisphosphate by the basic effector domain of myristoylated alanine-rich C kinase substrate is due to nonspecific electrostatic interactions.
    J Biol Chem. 2002 Sep 13;277(37):34401-12 PMID: 12097325
  39. Signaling with phosphoinositides: better than binary.
    Mol Interv. 2001 Aug;1(3):150-9 PMID: 14993348
  40. Membrane orientation and position of the C2 domain from cPLA2 by site-directed spin labeling.
    Biochemistry. 2002 May 21;41(20):6282-92 PMID: 12009889
  41. How synaptotagmin promotes membrane fusion.
    Science. 2007 May 25;316(5828):1205-8 PMID: 17478680
  42. Membrane structure of protein kinase C and calmodulin binding domain of myristoylated alanine rich C kinase substrate determined by site-directed spin labeling.
    Biochemistry. 1996 Mar 5;35(9):2917-25 PMID: 8608129
  43. Structure and function of SNARE and SNARE-interacting proteins.
    Q Rev Biophys. 2005 Feb;38(1):1-47 PMID: 16336742
  44. Membrane-bound orientation and position of the synaptotagmin C2B domain determined by site-directed spin labeling.
    Biochemistry. 2005 Jan 11;44(1):18-28 PMID: 15628842
Article Info
Journal
Biochemistry
Abbr.
Biochemistry
ISSN
1520-4995
Published
2011-04-05
Epub
2011-00-07
Pages
2633-41
Language
English
Region
United States
NLM ID
0370623
PMCID
PMC3071796
Subset
IM
Grants
NIGMS NIH HHS · P01 GM072694 · United States
NIGMS NIH HHS · P01 GM072694-05S1 · United States
NIGMS NIH HHS · GM 072694 · United States
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