Home LiteratureArticle Details
PMID: 2204029 Published · ppublish English Journal Article Research Support, U.S. Gov't, P.H.S.

Characterization of unr; a gene closely linked to N-ras.

Nucleic acids research ·Vol. 18 ·No. 16 ·1990-08-25 ·Pages 4891-9

Jeffers M, Paciucci R, Pellicer A

Abstract

The mammalian N-ras gene is believed to play a role in cellular proliferation, differentiation, and transformation. While investigating N-ras, we isolated cDNA's that originate from a closely linked upstream gene. RNase protection assays reveal that this gene, unr, is transcribed in the same direction as N-ras and that its 3' end is located just 130 base pairs away from the point at which N-ras transcription begins. The close spatial relationship between the two genes is conserved in all species from which the N-ras gene has been isolated. An open reading frame, potentially encoding a 798 amino acid protein, is contained within the unr cDNA. Neither the primary protein structure nor the nucleic acid sequence of unr is homologous to any other known gene, including N-ras. Unr transcripts are detected in mouse, rat and human cells, and Southern analysis indicates that the unr locus found immediately upstream of the N-ras gene is transcriptionaly active in the mouse since only a single copy of unr is detected in this species. Unr produces multiple transcripts that differ in their 3' ends and are apparently created through the differential use of multiple polyadenylation sites located in the 3' untranslated region of the gene. Both unr and N-ras are expressed in all tissues examined. In the testis, both genes are developmentally regulated, with an increase in expression occurring upon testicular maturation. Thus the two genes may be coordinately regulated, at least in certain circumstances. Our findings suggest that a thorough analysis of the relationship that exists between the two genes could potentially provide insights into the regulation and/or function of N-ras.

MeSH Terms
Amino Acid Sequence Animals Base Sequence Blotting, Southern DNA/genetics,isolation & purification Gene Expression Regulation Gene Library Genes Genes, ras Genetic Linkage Humans Male Mice Molecular Sequence Data RNA-Binding Proteins/metabolism Rats Ribonucleases/metabolism Sequence Homology, Nucleic Acid Testis/growth & development,metabolism Transcription, Genetic
Chemicals
Csde1 protein, rat RNA-Binding Proteins DNA Ribonucleases
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Jeffers M
Department of Pathology, New York University Medical Center, NY 10016.
Paciucci R
Pellicer A
References (39)
39 references, click to expand
  1. Differential expression of the ras gene family in mice.
    Mol Cell Biol. 1987 Apr;7(4):1535-40 PMID: 3600635
  2. Cell-specific expression of the human complement protein factor B gene: evidence for the role of two distinct 5'-flanking elements.
    Cell. 1987 Jan 30;48(2):331-42 PMID: 3643061
  3. ras genes.
    Annu Rev Biochem. 1987;56:779-827 PMID: 3304147
  4. Position-independent, high-level expression of the human beta-globin gene in transgenic mice.
    Cell. 1987 Dec 24;51(6):975-85 PMID: 3690667
  5. Coordinate N-ras mRNA up-regulation with mutational activation in tumorigenic guinea pig cells.
    Nucleic Acids Res. 1988 Feb 11;16(3):969-80 PMID: 3278301
  6. Expression of cellular protooncogenes in the mouse male germ line: a distinctive 2.4-kilobase pim-1 transcript is expressed in haploid postmeiotic cells.
    Proc Natl Acad Sci U S A. 1988 Apr;85(7):2191-5 PMID: 2965388
  7. Polyadenylation of mRNA precursors.
    Biochim Biophys Acta. 1988 May 6;950(1):1-12 PMID: 2896017
  8. Mouse N-ras genes: organization of the functional locus and of a truncated cDNA-like pseudogene.
    Oncogene Res. 1987 Jul;1(2):129-36 PMID: 2835730
  9. Differential conservation of non-coding regions within human and guinea pig N-ras genes.
    Oncogene. 1987;1(3):331-4 PMID: 3133626
  10. Physical linkage of the genes for platelet membrane glycoproteins IIb and IIIa.
    Proc Natl Acad Sci U S A. 1988 Nov;85(22):8683-7 PMID: 3186752
  11. The scanning model for translation: an update.
    J Cell Biol. 1989 Feb;108(2):229-41 PMID: 2645293
  12. Characterization of the human c-K-ras gene promoter.
    Oncogene Res. 1988 Sep;3(2):125-30 PMID: 3067187
  13. Coordinate expression of insulin-like growth factor II and its receptor during muscle differentiation.
    Proc Natl Acad Sci U S A. 1989 Mar;86(5):1543-7 PMID: 2537977
  14. How RNA polymerase II terminates transcription in higher eukaryotes.
    Trends Biochem Sci. 1989 Mar;14(3):105-10 PMID: 2658217
  15. Glucose-regulated protein (GRP94 and GRP78) genes share common regulatory domains and are coordinately regulated by common trans-acting factors.
    Mol Cell Biol. 1989 May;9(5):2153-62 PMID: 2546060
  16. Structural and functional properties of ras proteins.
    FASEB J. 1989 Aug;3(10):2151-63 PMID: 2666231
  17. Detection of specific sequences among DNA fragments separated by gel electrophoresis.
    J Mol Biol. 1975 Nov 5;98(3):503-17 PMID: 1195397
  18. DNA sequencing with chain-terminating inhibitors.
    Proc Natl Acad Sci U S A. 1977 Dec;74(12):5463-7 PMID: 271968
  19. Isolation of biologically active ribonucleic acid from sources enriched in ribonuclease.
    Biochemistry. 1979 Nov 27;18(24):5294-9 PMID: 518835
  20. Localization of the src gene product of the Harvey strain of MSV to plasma membrane of transformed cells by electron microscopic immunocytochemistry.
    Cell. 1980 Apr;19(4):1005-14 PMID: 6247068
  21. Tumorigenic transformation of mammalian cells induced by a normal human gene homologous to the oncogene of Harvey murine sarcoma virus.
    Nature. 1982 Jun 10;297(5866):479-83 PMID: 6283358
  22. A simple method for displaying the hydropathic character of a protein.
    J Mol Biol. 1982 May 5;157(1):105-32 PMID: 7108955
  23. G proteins and dual control of adenylate cyclase.
    Cell. 1984 Mar;36(3):577-9 PMID: 6321035
  24. Mechanism of activation of an N-ras gene in the human fibrosarcoma cell line HT1080.
    EMBO J. 1984 Jun;3(6):1321-6 PMID: 6086315
  25. The product of ras is a GTPase and the T24 oncogenic mutant is deficient in this activity.
    Nature. 1984 Sep 20-26;311(5983):273-5 PMID: 6148703
  26. Efficient in vitro synthesis of biologically active RNA and RNA hybridization probes from plasmids containing a bacteriophage SP6 promoter.
    Nucleic Acids Res. 1984 Sep 25;12(18):7035-56 PMID: 6091052
  27. Multiple mRNAs for 3-hydroxy-3-methylglutaryl coenzyme A reductase determined by multiple transcription initiation sites and intron splicing sites in the 5'-untranslated region.
    J Biol Chem. 1985 Aug 25;260(18):10369-77 PMID: 2991285
  28. Haploid expression of a unique c-abl transcript in the mouse male germ line.
    Mol Cell Biol. 1985 Jul;5(7):1791-4 PMID: 4022013
  29. Human N-ras: cDNA cloning and gene structure.
    Nucleic Acids Res. 1985 Jul 25;13(14):5255-68 PMID: 2991860
  30. Characterization and sequence of the promoter region of the human epidermal growth factor receptor gene.
    Proc Natl Acad Sci U S A. 1985 Aug;82(15):4920-4 PMID: 2991899
  31. Report of the Committee on the Genetic Constitution of Chromosomes 1 and 2.
    Cytogenet Cell Genet. 1985;40(1-4):67-106 PMID: 3864603
  32. Promoter region of the human Harvey ras proto-oncogene: similarity to the EGF receptor proto-oncogene promoter.
    Science. 1985 Dec 20;230(4732):1378-81 PMID: 2999983
  33. Chromosome 1 in relation to human disease.
    J Med Genet. 1986 Apr;23(2):107-15 PMID: 3519970
  34. A new method for predicting signal sequence cleavage sites.
    Nucleic Acids Res. 1986 Jun 11;14(11):4683-90 PMID: 3714490
  35. Tissue-specific heterogeneity of the 3'-untranslated region of L-type pyruvate kinase mRNAs.
    Eur J Biochem. 1986 Jul 1;158(1):33-41 PMID: 2874025
  36. Transcriptional interference and termination between duplicated alpha-globin gene constructs suggests a novel mechanism for gene regulation.
    Nature. 1986 Aug 7-13;322(6079):562-5 PMID: 3736674
  37. Complex transcriptional units: diversity in gene expression by alternative RNA processing.
    Annu Rev Biochem. 1986;55:1091-117 PMID: 3017190
  38. Transformation and stimulation of DNA synthesis in NIH-3T3 cells are a titratable function of normal p21N-ras expression.
    EMBO J. 1986 Oct;5(10):2617-21 PMID: 3023052
  39. Single-step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction.
    Anal Biochem. 1987 Apr;162(1):156-9 PMID: 2440339
Article Info
Journal
Nucleic acids research
Abbr.
Nucleic Acids Res
ISSN
0305-1048
Published
1990-08-25
Pages
4891-9
Language
English
Region
England
NLM ID
0411011
PMCID
PMC331975
Subset
IM
Grants
NCI NIH HHS · CA16239 · United States
NCI NIH HHS · CA36327 · United States
Databases
GENBANK
X52311
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]