Abstract
To understand the morphogenetic and physiological processes occurring during plant embryogenesis, we isolated cDNA clones homologous to genes preferentially expressed during somatic embryogenesis. One of these cDNA clones detected an embryo-specific mRNA species with a corresponding protein of 66 kDa. The expression pattern of the mRNA is similar between somatic and zygotic embryos of carrots. To characterize the gene encoding this mRNA, we isolated the corresponding genomic clones. Molecular analysis of the DNA from several haploid and diploid carrots showed that the mRNA was encoded by a single copy gene, named DC 8. DNA sequence analysis showed that the gene consisted of three exons and coded for a hydrophilic protein with a central region composed of 17 repeats. At the NH2-terminus no typical signal sequence was found. Immunocytochemical analysis localized the protein primarily in the vacuoles and protein bodies of zygotic embryos; the cytoplasm showed some antibody staining. The protein was also found in cell walls of endosperm tissue. The amount of DC 8 protein was too low for it to be categorized as a seed storage protein; its role in embryo-genesis remains to be determined.
MeSH Terms
Alleles
Amino Acid Sequence
Base Sequence
Blotting, Northern
Blotting, Southern
Cloning, Molecular
Exons
Genes
Immunohistochemistry
Molecular Sequence Data
Plant Proteins/analysis,genetics
Plants/embryology,genetics
Polymorphism, Restriction Fragment Length
Protein Biosynthesis
Restriction Mapping
Sequence Homology, Nucleic Acid
Chemicals
Plant Proteins
DC8 protein, Daucus carota
Authors & Affiliations
5 authors, click to expand affiliations / ORCID
Franz G
Department of Genetics, University of California, Berkeley 94720.
Hatzopoulos P
Jones T J
Krauss M
Sung Z R
References (32)
32 references, click to expand
-
Cloning of genes developmentally regulated during plant embryogenesis.
Proc Natl Acad Sci U S A. 1987 Apr;84(7):1906-10
PMID: 16593822
-
Cleavage of structural proteins during the assembly of the head of bacteriophage T4.
Nature. 1970 Aug 15;227(5259):680-5
PMID: 5432063
-
Genomic sequencing.
Proc Natl Acad Sci U S A. 1984 Apr;81(7):1991-5
PMID: 6326095
-
Developmental regulation of embryonic genes in plants.
Proc Natl Acad Sci U S A. 1988 Sep;85(17):6399-403
PMID: 16593974
-
Purification of biologically active globin messenger RNA by chromatography on oligothymidylic acid-cellulose.
Proc Natl Acad Sci U S A. 1972 Jun;69(6):1408-12
PMID: 4504350
-
Turbidimetric measurement of plant cell culture growth.
Plant Physiol. 1976 Mar;57(3):460-2
PMID: 16659505
-
Molecular and phenotypic variation of the white locus region in Drosophila melanogaster.
Genetics. 1988 Sep;120(1):199-212
PMID: 2906026
-
Efficient isolation of genes by using antibody probes.
Proc Natl Acad Sci U S A. 1983 Mar;80(5):1194-8
PMID: 6219389
-
A new method for predicting signal sequence cleavage sites.
Nucleic Acids Res. 1986 Jun 11;14(11):4683-90
PMID: 3714490
-
Signal sequences. The limits of variation.
J Mol Biol. 1985 Jul 5;184(1):99-105
PMID: 4032478
-
Transcriptional and post-transcriptional regulation of soybean seed protein mRNA levels.
Proc Natl Acad Sci U S A. 1986 Apr;83(7):2123-7
PMID: 16593677
-
Compilation of published signal sequences.
Nucleic Acids Res. 1984 Jul 11;12(13):5145-64
PMID: 6379599
-
Comparative biochemistry of plant glycoproteins.
Biochem Soc Trans. 1979 Aug;7(4):783-99
PMID: 383552
-
Electrophoretic transfer of proteins from polyacrylamide gels to nitrocellulose sheets: procedure and some applications.
Proc Natl Acad Sci U S A. 1979 Sep;76(9):4350-4
PMID: 388439
-
Rapid and sensitive protein similarity searches.
Science. 1985 Mar 22;227(4693):1435-41
PMID: 2983426
-
Coordinate accumulation of homeologous transcripts of seven cotton Lea gene families during embryogenesis and germination.
Dev Biol. 1987 Sep;123(1):213-21
PMID: 3622929
-
A nuclear protein associated with cell divisions in plants.
Planta. 1988 Dec;174(4):462-72
PMID: 24221561
-
DNA sequencing with chain-terminating inhibitors.
Proc Natl Acad Sci U S A. 1977 Dec;74(12):5463-7
PMID: 271968
-
The two classes of genes for the major potato tuber protein, patatin, are differentially expressed in tubers and roots.
Nucleic Acids Res. 1987 Mar 11;15(5):1979-94
PMID: 3031583
-
Nutrient requirements of suspension cultures of soybean root cells.
Exp Cell Res. 1968 Apr;50(1):151-8
PMID: 5650857
-
A convenient and adaptable package of computer programs for DNA and protein sequence management, analysis and homology determination.
Nucleic Acids Res. 1984 Jan 11;12(1 Pt 2):643-55
PMID: 6320100
-
pEMBL: a new family of single stranded plasmids.
Nucleic Acids Res. 1983 Mar 25;11(6):1645-55
PMID: 6300771
-
An inspection of the domain between putative TATA box and translation start site in 79 plant genes.
Nucleic Acids Res. 1987 Aug 25;15(16):6643-53
PMID: 3628002
-
Prediction of protein conformation.
Biochemistry. 1974 Jan 15;13(2):222-45
PMID: 4358940
-
Translational and transcriptional control elements in the untranslated leader of the heat-shock gene hsp22.
Cell. 1986 Feb 14;44(3):429-38
PMID: 3943132
-
Buffer gradient gels and 35S label as an aid to rapid DNA sequence determination.
Proc Natl Acad Sci U S A. 1983 Jul;80(13):3963-5
PMID: 6575390
-
Nuclear pre-mRNA processing in plants: distinct modes of 3'-splice-site selection in plants and animals.
Mol Cell Biol. 1988 May;8(5):2042-51
PMID: 3386632
-
Molecular population genetics of the alcohol dehydrogenase gene region of Drosophila melanogaster.
Genetics. 1986 Dec;114(4):1165-90
PMID: 3026893
-
Sequence and characterization of 6 Lea proteins and their genes from cotton.
Plant Mol Biol. 1988 May;11(3):277-91
PMID: 24272341
-
3' non-coding region sequences in eukaryotic messenger RNA.
Nature. 1976 Sep 16;263(5574):211-4
PMID: 822353
-
Organization and expression of eucaryotic split genes coding for proteins.
Annu Rev Biochem. 1981;50:349-83
PMID: 6791577
-
Naturally occurring variation in the restriction map of the amy region of Drosophila melanogaster.
Genetics. 1988 Jul;119(3):619-29
PMID: 17246437