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PMID: 2836614 Published · ppublish English Journal Article Research Support, U.S. Gov't, P.H.S.

Genetic evidence that the avian retrovirus DNA endonuclease domain of pol is necessary for viral integration.

Journal of virology ·Vol. 62 ·No. 7 ·1988-07-00 ·Pages 2307-12

Quinn TP, Grandgenett DP

Abstract

We used in vitro mutagenesis in the 3' region of the avian retrovirus polymerase (pol) gene to genetically define the role of the DNA endonuclease domain. In-frame insertional mutations, which were dispersed throughout the 5' region of pp32, produced a series of five replication-deficient mutants. In contrast, a single point mutant (Ala----Pro) located 48 amino acids from the NH2 terminus of pp32 exhibited a delayed replication phenotype. Molecular analysis of this mutant demonstrated that upon infection it was capable of synthesizing both linear and circular species of unintegrated viral DNA. The levels of unintegrated viral DNA present in cells infected with the mutant virus were several times greater than wild-type levels. Quantitation of the amount of integrated viral genomes demonstrated that the mutant virus integrated viral DNA one-fifth as efficiently as wild-type virus. This single point mutation in the NH2 terminus of pp32 prevented efficient integration of viral DNA, with no apparent effect on viral DNA synthesis per se. Thus, the DNA endonuclease domain has been genetically defined as necessary for avian retrovirus integration.

MeSH Terms
Avian Sarcoma Viruses/enzymology,genetics DNA, Viral/metabolism DNA-Directed DNA Polymerase/genetics,physiology Endodeoxyribonucleases/genetics,physiology Recombination, Genetic Retroviridae Proteins/genetics,physiology Virus Replication
Chemicals
DNA, Viral Retroviridae Proteins avian retrovirus proteins DNA-Directed DNA Polymerase Endodeoxyribonucleases
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Quinn T P
Institute for Molecular Virology, St. Louis University Medical Center, Missouri 63110.
Grandgenett D P
References (25)
25 references, click to expand
  1. Selective cleavage in the avian retroviral long terminal repeat sequence by the endonuclease associated with the alpha beta form of avian reverse transcriptase.
    Proc Natl Acad Sci U S A. 1983 Nov;80(22):6745-9 PMID: 6196775
  2. Mechanism of action of the endonuclease associated with the alpha beta and beta beta forms of avian RNA tumor virus reverse transcriptase.
    J Virol. 1983 Feb;45(2):727-39 PMID: 6187936
  3. New procedure for DNA transfection with polycation and dimethyl sulfoxide.
    Mol Cell Biol. 1984 Jun;4(6):1172-4 PMID: 6330534
  4. Construction and analysis of deletion mutations in the pol gene of Moloney murine leukemia virus: a new viral function required for productive infection.
    Cell. 1984 Jul;37(3):1043-52 PMID: 6204767
  5. Requirement of the avian retrovirus pp32 DNA binding protein domain for replication.
    Virology. 1984 Sep;137(2):358-70 PMID: 6091334
  6. A mutant murine leukemia virus with a single missense codon in pol is defective in a function affecting integration.
    Proc Natl Acad Sci U S A. 1984 Oct;81(20):6461-5 PMID: 6208550
  7. The retrovirus pol gene encodes a product required for DNA integration: identification of a retrovirus int locus.
    Proc Natl Acad Sci U S A. 1984 Dec;81(24):7885-9 PMID: 6083562
  8. Rapid and efficient site-specific mutagenesis without phenotypic selection.
    Proc Natl Acad Sci U S A. 1985 Jan;82(2):488-92 PMID: 3881765
  9. A new class of endogenous human retroviral genomes.
    Science. 1985 Jun 7;228(4704):1208-11 PMID: 2408338
  10. Mutants of the Rous sarcoma virus reverse transcriptase gene are nondefective in early replication events.
    J Biol Chem. 1985 Jul 15;260(14):8250-6 PMID: 2409084
  11. Site-specific nicking at the avian retrovirus LTR circle junction by the viral pp32 DNA endonuclease.
    Nucleic Acids Res. 1985 Sep 11;13(17):6205-21 PMID: 2995920
  12. Selective extraction of polyoma DNA from infected mouse cell cultures.
    J Mol Biol. 1967 Jun 14;26(2):365-9 PMID: 4291934
  13. Calcium-dependent bacteriophage DNA infection.
    J Mol Biol. 1970 Oct 14;53(1):159-62 PMID: 4922220
  14. Studies on the reverse transcriptase of RNA tumor viruses. Structural relatedness of two subunits of avian RNA tumor viruses.
    Proc Natl Acad Sci U S A. 1974 Dec;71(12):4991-4 PMID: 4140514
  15. Covalently closed circular DNA of avian sarcoma virus: purification from nuclei of infected quail tumor cells and measurement by electron microscopy and gel electrophoresis.
    J Mol Biol. 1976 Sep 15;106(2):337-57 PMID: 185393
  16. RNA-dependent DNA polymerase of avian sarcoma virus B77. I. Isolation and partial characterization of the alpha, beta2, and alphabeta forms of the enzyme.
    J Biol Chem. 1977 Apr 10;252(7):2281-9 PMID: 66234
  17. DNA sequencing with chain-terminating inhibitors.
    Proc Natl Acad Sci U S A. 1977 Dec;74(12):5463-7 PMID: 271968
  18. Virus-coded origin of a 32,000-dalton protein from avian retrovirus cores: structural relatedness of p32 and the beta polypeptide of the avian retrovirus DNA polymerase.
    J Virol. 1978 Oct;28(1):279-91 PMID: 81316
  19. Endonuclease activity of purified RNA-directed DNA polymerase from avian myeloblastosis virus.
    J Biol Chem. 1979 Mar 10;254(5):1606-13 PMID: 83998
  20. A rapid alkaline extraction procedure for screening recombinant plasmid DNA.
    Nucleic Acids Res. 1979 Nov 24;7(6):1513-23 PMID: 388356
  21. Synthesis and processing of polymerase proteins of wild-type and mutant avian retroviruses.
    J Virol. 1980 Oct;36(1):62-78 PMID: 6160263
  22. Partial phosphorylation in vivo of the avian retrovirus pp32 DNA endonuclease.
    J Virol. 1980 Dec;36(3):889-93 PMID: 6257933
  23. Avian retrovirus pp32 DNA-binding protein. I. Recognition of specific sequences on retrovirus DNA terminal repeats.
    J Virol. 1982 Oct;44(1):330-43 PMID: 6292495
  24. Nucleotide sequence of Rous sarcoma virus.
    Cell. 1983 Mar;32(3):853-69 PMID: 6299578
  25. Linker tailing: unphosphorylated linker oligonucleotides for joining DNA termini.
    DNA. 1984;3(2):173-82 PMID: 6327214
Article Info
Journal
Journal of virology
Abbr.
J Virol
ISSN
0022-538X
Published
1988-07-00
Pages
2307-12
Language
English
Region
United States
NLM ID
0113724
PMCID
PMC253383
Subset
IM
Grants
NCI NIH HHS · CA 16312 · United States
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