Home LiteratureArticle Details
PMID: 3127381 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, Non-P.H.S. Research Support, U.S. Gov't, P.H.S.

Translational attenuation control of ermSF, an inducible resistance determinant encoding rRNA N-methyltransferase from Streptomyces fradiae.

Journal of bacteriology ·Vol. 170 ·No. 4 ·1988-04-00 ·Pages 1800-11

Kamimiya S, Weisblum B

Abstract

An inducible resistance determinant, ermSF, from the tylosin producer Streptomyces fradiae NRRL 2338 has been cloned, sequenced, and shown to confer inducible macrolide-lincosamide-streptogramin B resistance when transferred to Streptomyces griseofuscus NRRL 23916. From mapping studies with S1 nuclease to locate the site of transcription initiation, the ermSF message contains a 385-nucleotide 5' leader sequence upstream from the 960-nucleotide major open reading frame that encodes the resistance determinant. On the basis of the potential secondary structure that the ermSF leader can assume, a translational attenuation model similar to that for ermC is proposed. The model is supported by mutational analysis involving deletions in the proposed attenuator. By analysis with restriction endonucleases, ermSF is indistinguishable from the tlrA gene described by Birmingham et al. (V. A. Birmingham, K. L. Cox, J. L. Larson, S. E. Fishman, C. L. Hershberger, and E. T. Seno, Mol. Gen. Genet. 204:532-539, 1986) which comprises one of at least three genes from S. fradiae that can confer tylosin resistance when subcloned into S. griseofuscus. When tested for inducibility, ermSF appears to be strongly induced by erythromycin, but not by tylosin.

MeSH Terms
Amino Acid Sequence Anti-Bacterial Agents/pharmacology Base Sequence Cloning, Molecular DNA, Bacterial/genetics Drug Resistance, Microbial/genetics Erythromycin/pharmacology Gene Expression Regulation Genes, Bacterial Leucomycins/pharmacology Lincosamides Macrolides Methyltransferases/genetics Molecular Sequence Data Mutation Phenotype Protein Biosynthesis Protein Sorting Signals/genetics Streptomyces/drug effects,enzymology,genetics Transcription, Genetic Virginiamycin/pharmacology
Chemicals
Anti-Bacterial Agents DNA, Bacterial Leucomycins Lincosamides Macrolides Protein Sorting Signals Virginiamycin Erythromycin Methyltransferases rRNA (adenosine-O-2'-)methyltransferase
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Kamimiya S
Pharmacology Department, University of Wisconsin Medical School, Madison 53706.
Weisblum B
References (40)
40 references, click to expand
  1. Use of tetrazolium for improved resolution of bacteriophage plaques.
    J Bacteriol. 1966 Sep;92(3):787-8 PMID: 4224220
  2. DNA sequence and regulation of ermD, a macrolide-lincosamide-streptogramin B resistance element from Bacillus licheniformis.
    Mol Gen Genet. 1984;194(3):349-56 PMID: 6429477
  3. Erythromycin-inducible resistance in Staphylococcus aureus: requirements for induction.
    J Bacteriol. 1971 Jun;106(3):835-47 PMID: 4397638
  4. The 3'-terminal sequence of Escherichia coli 16S ribosomal RNA: complementarity to nonsense triplets and ribosome binding sites.
    Proc Natl Acad Sci U S A. 1974 Apr;71(4):1342-6 PMID: 4598299
  5. Detection of specific sequences among DNA fragments separated by gel electrophoresis.
    J Mol Biol. 1975 Nov 5;98(3):503-17 PMID: 1195397
  6. Labeling deoxyribonucleic acid to high specific activity in vitro by nick translation with DNA polymerase I.
    J Mol Biol. 1977 Jun 15;113(1):237-51 PMID: 881736
  7. Sizing and mapping of early adenovirus mRNAs by gel electrophoresis of S1 endonuclease-digested hybrids.
    Cell. 1977 Nov;12(3):721-32 PMID: 922889
  8. DNA sequencing with chain-terminating inhibitors.
    Proc Natl Acad Sci U S A. 1977 Dec;74(12):5463-7 PMID: 271968
  9. Genetic recombination in Streptomyces fradiae by protoplast fusion and cell regeneration.
    J Gen Microbiol. 1978 Jul;107(1):93-102 PMID: 731205
  10. 23S ribosomal ribonucleic acid of macrolide-producing streptomycetes contains methylated adenine.
    J Bacteriol. 1979 Mar;137(3):1464-7 PMID: 438126
  11. Ribose methylation and resistance to thiostrepton.
    Nature. 1979 Apr 26;278(5707):859-61 PMID: 440414
  12. Sequencing end-labeled DNA with base-specific chemical cleavages.
    Methods Enzymol. 1980;65(1):499-560 PMID: 6246368
  13. The relationship between base composition and codon usage in bacterial genes and its use for the simple and reliable identification of protein-coding sequences.
    Gene. 1984 Oct;30(1-3):157-66 PMID: 6096212
  14. Secondary structure of the circular form of the Tetrahymena rRNA intervening sequence: a technique for RNA structure analysis using chemical probes and reverse transcriptase.
    Proc Natl Acad Sci U S A. 1985 Feb;82(3):648-52 PMID: 2579378
  15. Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors.
    Gene. 1985;33(1):103-19 PMID: 2985470
  16. Nucleotide sequence of ermA, a macrolide-lincosamide-streptogramin B determinant in Staphylococcus aureus.
    J Bacteriol. 1985 May;162(2):633-40 PMID: 2985541
  17. Supercoil sequencing: a fast and simple method for sequencing plasmid DNA.
    DNA. 1985 Apr;4(2):165-70 PMID: 3996185
  18. An erythromycin-resistance gene from an erythromycin-producing strain of Arthrobacter sp.
    Gene. 1985;35(3):259-70 PMID: 4043733
  19. N-Methyl transferase of Streptomyces erythraeus that confers resistance to the macrolide-lincosamide-streptogramin B antibiotics: amino acid sequence and its homology to cognate R-factor enzymes from pathogenic bacilli and cocci.
    Gene. 1985;38(1-3):103-10 PMID: 3934045
  20. Cloning and analysis of the promoter region of the erythromycin resistance gene (ermE) of Streptomyces erythraeus.
    Gene. 1985;38(1-3):215-26 PMID: 2998943
  21. The minimal replicon of a streptomycete plasmid produces an ultrahigh level of plasmid DNA.
    Plasmid. 1986 May;15(3):199-209 PMID: 3012613
  22. Cloning and expression of a tylosin resistance gene from a tylosin-producing strain of Streptomyces fradiae.
    Mol Gen Genet. 1986 Sep;204(3):532-9 PMID: 3020383
  23. Cloning and analysis of ermG, a new macrolide-lincosamide-streptogramin B resistance element from Bacillus sphaericus.
    J Bacteriol. 1987 Jan;169(1):340-50 PMID: 3025178
  24. Two promoters from the Streptomyces plasmid pIJ101 and their expression in Escherichia coli.
    Gene. 1987;51(2-3):179-86 PMID: 3297922
  25. Cloning and nucleotide sequence of a carbomycin-resistance gene from Streptomyces thermotolerans.
    Gene. 1987;53(1):73-83 PMID: 3036668
  26. Naturally occurring macrolide-lincosamide-streptogramin B resistance in Bacillus licheniformis.
    J Bacteriol. 1981 Jan;145(1):129-37 PMID: 6780509
  27. Conformational alteration of mRNA structure and the posttranscriptional regulation of erythromycin-induced drug resistance.
    Nucleic Acids Res. 1980 Dec 20;8(24):6081-97 PMID: 6162157
  28. Optimal computer folding of large RNA sequences using thermodynamics and auxiliary information.
    Nucleic Acids Res. 1981 Jan 10;9(1):133-48 PMID: 6163133
  29. A family of r-determinants in Streptomyces spp. that specifies inducible resistance to macrolide, lincosamide, and streptogramin type B antibiotics.
    J Bacteriol. 1981 May;146(2):621-31 PMID: 6163765
  30. Posttranscriptional modification of mRNA conformation: mechanism that regulates erythromycin-induced resistance.
    Proc Natl Acad Sci U S A. 1980 Dec;77(12):7079-83 PMID: 6938954
  31. Translational attenuation of ermC: a deletion analysis.
    Mol Gen Genet. 1982;186(2):204-16 PMID: 6810064
  32. Physical analysis of antibiotic-resistance genes from Streptomyces and their use in vector construction.
    Gene. 1982 Nov;20(1):51-62 PMID: 6298066
  33. Biosynthesis of the macrolide antibiotic tylosin. A preferred pathway from tylactone to tylosin.
    J Antibiot (Tokyo). 1983 Feb;36(2):131-41 PMID: 6833128
  34. A complex attenuator regulates inducible resistance to macrolides, lincosamides, and streptogramin type B antibiotics in Streptococcus sanguis.
    J Bacteriol. 1983 Jun;154(3):1252-62 PMID: 6406429
  35. Sequence diversity among related genes for recognition of specific targets in DNA molecules.
    J Mol Biol. 1983 May 5;166(1):1-19 PMID: 6304321
  36. Site of action of a ribosomal RNA methylase responsible for resistance to erythromycin and other antibiotics.
    J Biol Chem. 1983 Oct 25;258(20):12702-6 PMID: 6195156
  37. Shuttle vectors for cloning recombinant DNA in Escherichia coli and Streptomyces griseofuscus C581.
    J Bacteriol. 1984 Jan;157(1):314-7 PMID: 6317655
  38. An improved colony hybridization method with significantly increased sensitivity for detection of single genes.
    Plasmid. 1983 Nov;10(3):296-8 PMID: 6657780
  39. Translational attenuation: the regulation of bacterial resistance to the macrolide-lincosamide-streptogramin B antibiotics.
    CRC Crit Rev Biochem. 1984;16(2):103-32 PMID: 6203682
  40. Altered methylation of ribosomal RNA in an erythromycin-resistant strain of Staphylococcus aureus.
    Proc Natl Acad Sci U S A. 1971 Apr;68(4):856-60 PMID: 5279527
Article Info
Journal
Journal of bacteriology
Abbr.
J Bacteriol
ISSN
0021-9193
Published
1988-04-00
Pages
1800-11
Language
English
Region
United States
NLM ID
2985120R
PMCID
PMC211034
Subset
IM
Grants
NIAID NIH HHS · AI-18283 · United States
NCI NIH HHS · CA-07175 · United States
NCRR NIH HHS · S10-RR01684 · United States
Databases
GENBANK
M19269
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]