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PMID: 6304618 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Complete nucleotide sequence of alfalfa mosaic virus RNA 2.

Nucleic acids research ·Vol. 11 ·No. 10 ·1983-05-25 ·Pages 3019-25

Cornelissen BJ, Brederode FT, Veeneman GH, van Boom JH, Bol JF

Abstract

Double-stranded cDNA of in vitro polyadenylated alfalfa mosaic virus (AlMV) RNA 2 has been cloned and sequenced. The use of an oligodeoxyribonucleotide corresponding to the known sequence of the 5'-end of RNA 2 to prime second-strand DNA synthesis, enabled us to construct the complete primary structure of AlMV RNA 2. The sequence of 2,593 nucleotides contains a long open reading frame for a protein of Mr 89,753 starting at the first AUG codon from the 5'-end. This coding region is flanked by a 5'-terminal sequence of 54 nucleotides and a 3'-noncoding region of 166 nucleotides which includes the sequence of 145 nucleotides the three genomic RNAs of AlMV have in common.

MeSH Terms
Amino Acid Sequence Base Sequence Cloning, Molecular Codon DNA/analysis DNA Restriction Enzymes Medicago sativa Molecular Weight Mosaic Viruses/genetics Oligodeoxyribonucleotides RNA, Viral/genetics Viral Proteins/genetics
Chemicals
Codon Oligodeoxyribonucleotides RNA, Viral Viral Proteins DNA DNA Restriction Enzymes
Authors & Affiliations
5 authors, click to expand affiliations / ORCID
Cornelissen B J
Brederode F T
Veeneman G H
van Boom J H
Bol J F
References (14)
14 references, click to expand
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Article Info
Journal
Nucleic acids research
Abbr.
Nucleic Acids Res
ISSN
0305-1048
Published
1983-05-25
Pages
3019-25
Language
English
Region
England
NLM ID
0411011
PMCID
PMC325944
Subset
IM
Databases
GENBANK
J02002, K02702
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