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PMID: 7049161 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Primary structure of major outer-membrane protein I (ompF protein, porin) of Escherichia coli B/r.

The Biochemical journal ·Vol. 203 ·No. 1 ·1982-04-01 ·Pages 33-43

Chen R, Krämer C, Schmidmayr W, Chen-Schmeisser U, Henning U

Abstract

In the outer membrane of Gram-negative bacteria hydrophilic pores exist, allowing the diffusion of various low-molecular-weight solutes. These pores are formed by proteins, the porins. In a preliminary communication [Chen, Krämer, Schmidmayr & Henning (1979) Proc. Natl. Acad. Sci. U.S.A. 76, 5014-5017] we presented the primary structure of one of these porins, the 340-amino-acid-residue protein I (ompF protein) from Escherichia coli B/r. In the present paper we give the experimental evidence for this sequence. Two tryptophan positions, one valine position, two aspartic acid positions and nine out of 82 amide determinations have been corrected. To aid further studies on this class of transmembrane proteins, the isolation of most of the constituent peptides is documented.

MeSH Terms
Amides/analysis Amino Acid Sequence Bacterial Outer Membrane Proteins Chromatography, Gel Cyanogen Bromide Escherichia coli/analysis Membrane Proteins Peptide Fragments/isolation & purification Trypsin Tryptophan/analysis
Chemicals
Amides Bacterial Outer Membrane Proteins Membrane Proteins Peptide Fragments Tryptophan Trypsin Cyanogen Bromide
Authors & Affiliations
5 authors, click to expand affiliations / ORCID
Chen R
Krämer C
Schmidmayr W
Chen-Schmeisser U
Henning U
References (33)
33 references, click to expand
  1. Cell envelope and shape of Escherichia coli K12. Isolation and preliminary characterization of the major ghost-membrane proteins.
    Eur J Biochem. 1974 Sep 1;47(2):343-52 PMID: 4606317
  2. Characterization of the major envelope protein from Escherichia coli. Regular arrangement on the peptidoglycan and unusual dodecyl sulfate binding.
    J Biol Chem. 1974 Dec 25;249(24):8019-29 PMID: 4609976
  3. The major proteins of the Excherichia coli outer cell envelope membrane. Preparative isolation of all major membrane proteins.
    Eur J Biochem. 1975 Nov 1;59(1):207-13 PMID: 812694
  4. The sequence determination of a protein in a micro scale: the sequence analysis of ribosomal protein L34 of Escherichia coli.
    Hoppe Seylers Z Physiol Chem. 1976 Jun;357(6):873-86 PMID: 783033
  5. A novel manual method for protein-sequence analysis.
    Biochem J. 1976 Jul 1;157(1):77-85 PMID: 822842
  6. Identification of the outer membrane protein of E. coli that produces transmembrane channels in reconstituted vesicle membranes.
    Biochem Biophys Res Commun. 1976 Aug 9;71(3):877-84 PMID: 786294
  7. Phage T6--colicin K receptor and nucleoside transport in Escherichia coli.
    FEBS Lett. 1976 Nov;70(1):109-12 PMID: 791677
  8. Ultrastructure of a periodic protein layer in the outer membrane of Escherichia coli.
    J Cell Biol. 1977 Feb;72(2):292-301 PMID: 319099
  9. Effects of heating in dodecyl sulfate solution on the conformation and electrophoretic mobility of isolated major outer membrane proteins from Escherichia coli K-12.
    J Biochem. 1976 Dec;80(6):1411-22 PMID: 828162
  10. Cleavage of tryptophanyl peptide bonds in cytochrome b5 by cyanogen bromide.
    J Biol Chem. 1977 Sep 10;252(17):5986-9 PMID: 893393
  11. Major proteins of the outer cell envelope membrane of Escherichia coli K-12: multiple species of protein I.
    Mol Gen Genet. 1977 Sep 9;154(3):293-8 PMID: 337109
  12. Arrangement of protein I in Escherichia coli outer membrane: cross-linking study.
    J Bacteriol. 1978 Jan;133(1):279-86 PMID: 338582
  13. Characterization of major outer membrane proteins O-8 and O-9 of Escherichia coli K-12. Evidence that structural genes for the two proteins are different.
    J Biochem. 1978 Apr;83(4):1095-100 PMID: 350864
  14. Formation of large, ion-permeable membrane channels by the matrix protein (porin) of Escherichia coli.
    Biochim Biophys Acta. 1978 Aug 17;511(3):305-19 PMID: 356882
  15. Identification of three genes controlling production of new outer membrane pore proteins in Escherichia coli K-12.
    J Bacteriol. 1978 Sep;135(3):1118-29 PMID: 357416
  16. Lysyl-derived aldehydes in outer membrane proteins of Escherichia coli.
    Proc Natl Acad Sci U S A. 1978 Aug;75(8):3708-12 PMID: 358196
  17. Matrix protein from Escherichia coli outer membranes forms voltage-controlled channels in lipid bilayers.
    Proc Natl Acad Sci U S A. 1978 Aug;75(8):3751-5 PMID: 358202
  18. Mutants (ompA) affecting a major outer membrane protein of Escherichia coli K12.
    Eur J Biochem. 1978 Dec;92(2):491-8 PMID: 367782
  19. Major proteins of the Escherichia coli outer cell envelope membrane. Sequence of the cyanogen bromide fragments of protein I from Escherichia coli B/r.
    Hoppe Seylers Z Physiol Chem. 1978 Dec;359(12):1807-10 PMID: 367913
  20. Subunit structure of functional porin oligomers that form permeability channels in the other membrane of Escherichia coli.
    J Biol Chem. 1979 Mar 10;254(5):1457-61 PMID: 368071
  21. Ionic selectivity of pores formed by the matrix protein (porin) of Escherichia coli.
    Biochim Biophys Acta. 1979 Mar 8;551(2):238-47 PMID: 369608
  22. Major proteins of the outer cell envelope membrane of Escherichia coli K12: multiple species of protein I differ in primary structure.
    Mol Gen Genet. 1978 Oct 30;166(2):187-92 PMID: 370544
  23. A major outer membrane protein (O-8) of Escherichia coli K-12 exists as a trimer in sodium dodecyl sulfate solution.
    FEBS Lett. 1979 Apr 1;100(1):71-4 PMID: 374117
  24. A porin activity of purified lambda-receptor protein from Escherichia coli in reconstituted vesicle membranes.
    Biochem Biophys Res Commun. 1979 Jun 13;88(3):774-81 PMID: 380570
  25. Primary structure of major outer membrane protein I of Escherichia coli B/r.
    Proc Natl Acad Sci U S A. 1979 Oct;76(10):5014-7 PMID: 388426
  26. Mitochondrial outer membrane contains a protein producing nonspecific diffusion channels.
    J Biol Chem. 1980 Mar 10;255(5):1771-4 PMID: 7354054
  27. Periplasmic maltose-binding protein confers specificity on the outer membrane maltose pore of Escherichia coli.
    J Bacteriol. 1980 Feb;141(2):431-5 PMID: 6444941
  28. Diffusion of solutes through channels produced by phage lambda receptor protein of Escherichia coli: inhibition by higher oligosaccharides of maltose series.
    Biochem Biophys Res Commun. 1980 Mar 13;93(1):166-71 PMID: 6990923
  29. Genes affecting the major outer membrane proteins of Escherichia coli K-12: mutations at nmpA and nmpB.
    Mol Gen Genet. 1980;177(4):681-9 PMID: 6991873
  30. Outer membrane protein e of Escherichia coli K-12 is co-regulated with alkaline phosphatase.
    J Bacteriol. 1980 Jul;143(1):151-7 PMID: 6995425
  31. Three-dimensional crystals of an integral membrane protein: an initial x-ray analysis.
    J Cell Biol. 1980 Jul;86(1):327-9 PMID: 6252213
  32. Primary structure of major outer membrane protein II (ompA protein) of Escherichia coli K-12.
    Proc Natl Acad Sci U S A. 1980 Aug;77(8):4592-6 PMID: 7001461
  33. THE STRUCTURE OF A CHYMOTRYPTIC PEPTIDE FROM PSEUDOMONAS CYTOCHROME C-551.
    Biochem J. 1963 Nov;89:379-80 PMID: 14084623
Article Info
Journal
The Biochemical journal
Abbr.
Biochem J
ISSN
0264-6021
Published
1982-04-01
Pages
33-43
Language
English
Region
England
NLM ID
2984726R
PMCID
PMC1158189
Subset
IM
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