Abstract
A quantitative endonuclease assay, which relies on the introduction of single and double strand breaks into supercoiled plasmid DNA, was used to study the activity of the extracellular nuclease of Serratia marcescens SM6 in buffer and in groundwater. The parallel enzyme concentration-dependent production of relaxed and linear plasmid molecules suggests that the nuclease produces single and double strand breaks in duplex DNA. Bovine serum albumin stimulated the nuclease activity towards DNA and RNA and increased the stability of the enzyme against thermal inactivation. The DNase activity at 4 degrees C and 50 degrees C was almost half of that at the optimum temperature (37 degrees C). The nuclease was active in groundwater, although the specific activity was lower than in buffer. In a groundwater aquifer microcosm, mineral-adsorbed transforming DNA was substantially less accessible to the nuclease than was dissolved DNA. The data suggest that the extracellular nuclease of Serratia marcescens may contribute to DNA turnover in the environment and that adsorption of DNA to minerals provides protection against the nuclease.
MeSH Terms
Chromosomes, Bacterial
DNA, Bacterial/metabolism
DNA, Superhelical/metabolism
Endonucleases/isolation & purification,metabolism
Escherichia coli/enzymology
Nucleic Acid Conformation
Plasmids/metabolism
Serratia marcescens/enzymology
Serum Albumin, Bovine/metabolism
Soil
Transformation, Bacterial
Water/chemistry
Chemicals
DNA, Bacterial
DNA, Superhelical
Soil
Water
Serum Albumin, Bovine
Endonucleases
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Ahrenholtz I
Fachbereich Biologie, Universität Oldenburg, Germany.
Lorenz M G
Wackernagel W
References (27)
27 references, click to expand
-
The extracellular metalloprotease of Serratia marcescens: I. Purification and characterization.
Mol Cell Biochem. 1976 Nov 30;13(2):95-100
PMID: 12465
-
Studies on transformation of Escherichia coli with plasmids.
J Mol Biol. 1983 Jun 5;166(4):557-80
PMID: 6345791
-
Crystallization and preliminary crystallographic analysis of a novel nuclease from Serratia marcescens.
J Mol Biol. 1991 Nov 5;222(1):27-30
PMID: 1658338
-
An extracellular nuclease from Serratia marcescens. II. Specificity of the enzyme.
J Biol Chem. 1969 Oct 10;244(19):5219-25
PMID: 4310088
-
The extracellular nuclease gene of Serratia marcescens and its secretion from Escherichia coli.
Gene. 1987;57(2-3):183-92
PMID: 3319779
-
Disulfide bonds are required for Serratia marcescens nuclease activity.
Nucleic Acids Res. 1992 Oct 11;20(19):4971-4
PMID: 1329033
-
Bleomycin-specific fragmentation of double-stranded DNA.
Biochemistry. 1978 May 16;17(10):1890-6
PMID: 77675
-
Plasmid transformation of naturally competent Acinetobacter calcoaceticus in non-sterile soil extract and groundwater.
Arch Microbiol. 1992;157(4):355-60
PMID: 1590708
-
Natural Transformation of Acinetobacter calcoaceticus by Plasmid DNA Adsorbed on Sand and Groundwater Aquifer Material.
Appl Environ Microbiol. 1993 May;59(5):1662-7
PMID: 16348943
-
Release of bacterial DNA by marine nanoflagellates, an intermediate step in phosphorus regeneration.
Appl Environ Microbiol. 1992 Nov;58(11):3744-50
PMID: 16348813
-
Highly efficient genetic transformation of Bacillus subtilis attached to sand grains.
J Gen Microbiol. 1988 Jan;134(1):107-12
PMID: 3141561
-
Adsorption of plasmid DNA to mineral surfaces and protection against DNase I.
Appl Environ Microbiol. 1991 Apr;57(4):1057-61
PMID: 1647748
-
Adsorption of DNA to sand and variable degradation rates of adsorbed DNA.
Appl Environ Microbiol. 1987 Dec;53(12):2948-52
PMID: 3435148
-
The pUC plasmids, an M13mp7-derived system for insertion mutagenesis and sequencing with synthetic universal primers.
Gene. 1982 Oct;19(3):259-68
PMID: 6295879
-
Rapid method for separation of bacterial DNA from humic substances in sediments for polymerase chain reaction.
Appl Environ Microbiol. 1992 Jul;58(7):2292-5
PMID: 1386212
-
Plasmid DNA in a groundwater aquifer microcosm--adsorption, DNAase resistance and natural genetic transformation of Bacillus subtilis.
Mol Ecol. 1993 Jun;2(3):171-81
PMID: 8167851
-
An extracellular nuclease from Serratia marcescens. I. Purification and some properties of the enzyme.
J Biol Chem. 1969 Oct 10;244(19):5213-8
PMID: 4899013
-
Degradation of dead microbial biomass in a marine sediment.
Appl Environ Microbiol. 1986 Sep;52(3):504-9
PMID: 16347148
-
A rapid alkaline extraction procedure for screening recombinant plasmid DNA.
Nucleic Acids Res. 1979 Nov 24;7(6):1513-23
PMID: 388356
-
Persistence of free plasmid DNA in soil monitored by various methods, including a transformation assay.
Appl Environ Microbiol. 1992 Sep;58(9):3012-9
PMID: 16348772
-
Isolation and characterization of nucleases from a clinical isolate of Serratia marcescens kums 3958.
J Biochem. 1983 May;93(5):1287-95
PMID: 6350276
-
ISOLATION AND PROPERTIES OF AN EXOCELLULAR NUCLEASE OF SERRATIA MARCESCENS.
J Bacteriol. 1963 Feb;85(2):273-8
PMID: 16561993
-
Purification and characterization of a Serratia marcescens nuclease produced by Escherichia coli.
Carlsberg Res Commun. 1989;54(1):17-27
PMID: 2665765
-
Correlation of competence for export with lack of tertiary structure of the mature species: a study in vivo of maltose-binding protein in E. coli.
Cell. 1986 Sep 12;46(6):921-8
PMID: 3530497
-
A simple, rapid, and sensitive DNA assay procedure.
Anal Biochem. 1980 Mar 1;102(2):344-52
PMID: 6158890
-
Turnover of extracellular DNA in eutrophic and oligotrophic freshwater environments of southwest Florida.
Appl Environ Microbiol. 1989 Jul;55(7):1823-8
PMID: 16347976
-
Transformation of Bacillus subtilis by DNA bound on montmorillonite and effect of DNase on the transforming ability of bound DNA.
Appl Environ Microbiol. 1992 Jun;58(6):1930-9
PMID: 1622268