Home LiteratureArticle Details
PMID: 8657162 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, P.H.S.

Genetic analysis of the bipolar pattern of bud site selection in the yeast Saccharomyces cerevisiae.

Molecular and cellular biology ·Vol. 16 ·No. 4 ·1996-04-00 ·Pages 1857-70

Zahner JE, Harkins HA, Pringle JR

Abstract

Previous analysis of the bipolar budding pattern of Saccharomyces cerevisiae has suggested that it depends on persistent positional signals that mark the region of the division site and the tip of the distal pole on a newborn daughter cell, as well as each previous division site on a mother cell. In an attempt to identify genes encoding components of these signals or proteins involved in positioning or responding to them, we identified 11 mutants with defects in bipolar but not in axial budding. Five mutants displaying a bipolar budding-specific randomization of budding pattern had mutations in four previously known genes (BUD2, BUD5, SPA2, and BNI1) and one novel gene (BUD6), respectively. As Bud2p and Bud5p are known to be required for both the axial and bipolar budding patterns, the alleles identified here probably encode proteins that have lost their ability to interact with the bipolar positional signals but have retained their ability to interact with the distinct positional signal used in axial budding. The function of Spa2p is not known, but previous work has shown that its intracellular localization is similar to that postulated for the bipolar positional signals. BNI1 was originally identified on the basis of genetic interaction with CDC12, which encodes one of the neck-filament-associated septin proteins, suggesting that these proteins may be involved in positioning the bipolar signals. One mutant with a heterogeneous budding pattern defines a second novel gene (BUD7). Two mutants budding almost exclusively from the proximal pole carry mutations in a fourth novel gene (BUD9). A bud8 bud9 double mutant also buds almost exclusively from the proximal pole, suggesting that Bud9p is involved in positioning the proximal pole signal rather than being itself a component of this signal.

MeSH Terms
Cell Polarity/genetics Chromosome Mapping Chromosomes, Fungal Genes, Fungal Genetic Complementation Test Genetic Markers Mutagenesis Saccharomyces cerevisiae/cytology,genetics Selection, Genetic
Chemicals
Genetic Markers
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Zahner J E
Department of Biology, University of North Carolina, Chapel Hill, 27599, USA.
Harkins H A
Pringle J R
References (62)
62 references, click to expand
  1. BUD2 encodes a GTPase-activating protein for Bud1/Rsr1 necessary for proper bud-site selection in yeast.
    Nature. 1993 Sep 16;365(6443):269-74 PMID: 8371782
  2. Budding and cell polarity in Saccharomyces cerevisiae.
    Curr Opin Genet Dev. 1991 Oct;1(3):342-50 PMID: 1840891
  3. The role of Myo2, a yeast class V myosin, in vesicular transport.
    J Cell Biol. 1995 Mar;128(6):1055-68 PMID: 7896871
  4. MAP kinase pathways in yeast: for mating and more.
    Cell. 1995 Jan 27;80(2):187-97 PMID: 7834739
  5. RSR1, a ras-like gene homologous to Krev-1 (smg21A/rap1A): role in the development of cell polarity and interactions with the Ras pathway in Saccharomyces cerevisiae.
    Mol Cell Biol. 1992 Feb;12(2):758-66 PMID: 1732742
  6. Yeast/E. coli shuttle vectors with multiple unique restriction sites.
    Yeast. 1986 Sep;2(3):163-7 PMID: 3333305
  7. Use of a screen for synthetic lethal and multicopy suppressee mutants to identify two new genes involved in morphogenesis in Saccharomyces cerevisiae.
    Mol Cell Biol. 1991 Mar;11(3):1295-305 PMID: 1996092
  8. Patterns of bud-site selection in the yeast Saccharomyces cerevisiae.
    J Cell Biol. 1995 May;129(3):751-65 PMID: 7730409
  9. Functional cloning of BUD5, a CDC25-related gene from S. cerevisiae that can suppress a dominant-negative RAS2 mutant.
    Cell. 1991 Jun 28;65(7):1225-31 PMID: 1905982
  10. Physical maps of the six smallest chromosomes of Saccharomyces cerevisiae at a resolution of 2.6 kilobase pairs.
    Genetics. 1993 May;134(1):81-150 PMID: 8514151
  11. A Saccharomyces cerevisiae genomic plasmid bank based on a centromere-containing shuttle vector.
    Gene. 1987;60(2-3):237-43 PMID: 3327750
  12. Studies concerning the temporal and genetic control of cell polarity in Saccharomyces cerevisiae.
    J Cell Biol. 1991 Aug;114(3):515-32 PMID: 1860883
  13. A synthetic lethal screen identifies SLK1, a novel protein kinase homolog implicated in yeast cell morphogenesis and cell growth.
    Mol Cell Biol. 1992 Mar;12(3):1162-78 PMID: 1545797
  14. Regulation of mating in the cell cycle of Saccharomyces cerevisiae.
    J Cell Biol. 1977 Nov;75(2 Pt 1):355-65 PMID: 400872
  15. Immunofluorescence localization of the unconventional myosin, Myo2p, and the putative kinesin-related protein, Smy1p, to the same regions of polarized growth in Saccharomyces cerevisiae.
    J Cell Biol. 1994 May;125(4):825-42 PMID: 8188749
  16. Actin structure and function: roles in mitochondrial organization and morphogenesis in budding yeast and identification of the phalloidin-binding site.
    Mol Biol Cell. 1993 Dec;4(12):1277-94 PMID: 8167410
  17. Reserve carbohydrate metabolism in Saccharomyces cerevisiae: responses to nutrient limitation.
    J Bacteriol. 1980 Sep;143(3):1384-94 PMID: 6997270
  18. The SPA2 gene of Saccharomyces cerevisiae is important for pheromone-induced morphogenesis and efficient mating.
    J Cell Biol. 1990 Oct;111(4):1451-64 PMID: 2211820
  19. Genetic Control of the Cell Division Cycle in Yeast: V. Genetic Analysis of cdc Mutants.
    Genetics. 1973 Jun;74(2):267-86 PMID: 17248617
  20. Genetic analysis of Cln/Cdc28 regulation of cell morphogenesis in budding yeast.
    EMBO J. 1993 Dec 15;12(13):5267-75 PMID: 8262069
  21. Genetic analysis of Saccharomyces cerevisiae chromosome I: on the role of mutagen specificity in delimiting the set of genes identifiable using temperature-sensitive-lethal mutations.
    Genetics. 1991 Feb;127(2):279-85 PMID: 2004703
  22. Genetic evidence for the roles of the bud-site-selection genes BUD5 and BUD2 in control of the Rsr1p (Bud1p) GTPase in yeast.
    Proc Natl Acad Sci U S A. 1993 Nov 1;90(21):9926-9 PMID: 8234337
  23. Classical mutagenesis techniques.
    Methods Enzymol. 1991;194:273-81 PMID: 2005792
  24. The yeast actin cytoskeleton.
    Curr Opin Cell Biol. 1994 Feb;6(1):110-9 PMID: 8167016
  25. Micromanipulation and dissection of asci.
    Methods Enzymol. 1991;194:21-37 PMID: 2005789
  26. Multicopy suppression of the cdc24 budding defect in yeast by CDC42 and three newly identified genes including the ras-related gene RSR1.
    Proc Natl Acad Sci U S A. 1989 Dec;86(24):9976-80 PMID: 2690082
  27. Yeast mutants affected in viability upon starvation have a modified phospholipid composition.
    Yeast. 1993 Mar;9(3):267-77 PMID: 8488727
  28. Evidence for a branched pathway in the polarized cell division of Saccharomyces cerevisiae.
    Curr Genet. 1995 Feb;27(3):213-6 PMID: 7736604
  29. The SPA2 protein of yeast localizes to sites of cell growth.
    J Cell Biol. 1989 Apr;108(4):1419-29 PMID: 2647769
  30. Molecular characterization of CDC42, a Saccharomyces cerevisiae gene involved in the development of cell polarity.
    J Cell Biol. 1990 Jul;111(1):143-52 PMID: 2164028
  31. Genetic and physical maps of Saccharomyces cerevisiae, Edition 11.
    Yeast. 1992 Oct;8(10):817-902 PMID: 1413997
  32. The proliferation of MAP kinase signaling pathways in yeast.
    Curr Opin Cell Biol. 1995 Apr;7(2):197-202 PMID: 7612271
  33. Role of yeast insulin-degrading enzyme homologs in propheromone processing and bud site selection.
    Science. 1995 Oct 20;270(5235):464-7 PMID: 7569998
  34. Role of neighbouring bases and assessment of strand specificity in ethylmethanesulphonate and N-methyl-N'-nitro-N-nitrosoguanidine mutagenesis in the SUP4-o gene of Saccharomyces cerevisiae.
    J Mol Biol. 1988 Dec 5;204(3):561-8 PMID: 3066906
  35. Yeast G1 cyclins CLN1 and CLN2 and a GAP-like protein have a role in bud formation.
    EMBO J. 1993 Dec 15;12(13):5277-86 PMID: 8262070
  36. Interconversion of Yeast Mating Types III. Action of the Homothallism (HO) Gene in Cells Homozygous for the Mating Type Locus.
    Genetics. 1977 Mar;85(3):395-405 PMID: 17248736
  37. Study of scar formation in the life cycle of heterothallic Saccharomyces cerevisiae.
    Can J Microbiol. 1970 Sep;16(9):827-31 PMID: 5528225
  38. Methods for monitoring the growth of yeast cultures and for dealing with the clumping problem.
    Methods Cell Biol. 1975;11:131-68 PMID: 1102845
  39. Yeast BUD5, encoding a putative GDP-GTP exchange factor, is necessary for bud site selection and interacts with bud formation gene BEM1.
    Cell. 1991 Jun 28;65(7):1213-24 PMID: 1905981
  40. Cell polarity in yeast.
    Trends Genet. 1994 Sep;10(9):328-33 PMID: 7974747
  41. A yeast gene (BEM1) necessary for cell polarization whose product contains two SH3 domains.
    Nature. 1992 Mar 5;356(6364):77-9 PMID: 1538785
  42. DNA sequence analysis of the mutational specificity of u.v. light in the SUP4-o gene of yeast.
    Mutagenesis. 1987 Nov;2(6):445-53 PMID: 2832698
  43. A Ser/Thr-rich multicopy suppressor of a cdc24 bud emergence defect.
    Yeast. 1992 Apr;8(4):315-23 PMID: 1514328
  44. A yeast gene necessary for bud-site selection encodes a protein similar to insulin-degrading enzymes.
    Nature. 1994 Dec 8;372(6506):567-70 PMID: 7990931
  45. Roles of the CDC24 gene product in cellular morphogenesis during the Saccharomyces cerevisiae cell cycle.
    J Cell Biol. 1981 Jun;89(3):395-405 PMID: 7019215
  46. Genetic control of bud site selection in yeast by a set of gene products that constitute a morphogenetic pathway.
    Cell. 1991 Jun 28;65(7):1203-12 PMID: 2065354
  47. Alteration of a yeast SH3 protein leads to conditional viability with defects in cytoskeletal and budding patterns.
    Mol Cell Biol. 1993 Aug;13(8):5070-84 PMID: 8336735
  48. The septins: roles in cytokinesis and other processes.
    Curr Opin Cell Biol. 1996 Feb;8(1):106-19 PMID: 8791410
  49. Specification of sites for polarized growth in Saccharomyces cerevisiae and the influence of external factors on site selection.
    Mol Biol Cell. 1992 Sep;3(9):1025-35 PMID: 1421575
  50. Interactions among proteins involved in bud-site selection and bud-site assembly in Saccharomyces cerevisiae.
    J Biol Chem. 1995 Jan 13;270(2):626-30 PMID: 7822288
  51. Role of Bud3p in producing the axial budding pattern of yeast.
    J Cell Biol. 1995 May;129(3):767-78 PMID: 7730410
  52. Bud position in Saccharomyces cerevisiae.
    J Bacteriol. 1960 Oct;80:567-8 PMID: 13701687
  53. Development of cell polarity in budding yeast.
    Cell. 1991 Jun 28;65(7):1093-6 PMID: 1905977
  54. Mapping of the Saccharomyces cerevisiae CDC3, CDC25, and CDC42 genes to chromosome XII by chromosome blotting and tetrad analysis.
    Yeast. 1987 Dec;3(4):243-53 PMID: 3332976
  55. Actin cytoskeleton and budding pattern are altered in the yeast rvs161 mutant: the Rvs161 protein shares common domains with the brain protein amphiphysin.
    Mol Gen Genet. 1995 Feb 20;246(4):485-95 PMID: 7891662
  56. Sterile host yeasts (SHY): a eukaryotic system of biological containment for recombinant DNA experiments.
    Gene. 1979 Dec;8(1):17-24 PMID: 395030
  57. Yeast mutant affected for viability upon nutrient starvation: characterization and cloning of the RVS161 gene.
    Yeast. 1991 Oct;7(7):727-43 PMID: 1776363
  58. Staining of bud scars and other cell wall chitin with calcofluor.
    Methods Enzymol. 1991;194:732-5 PMID: 2005820
  59. General resistance to sterol biosynthesis inhibitors in Saccharomyces cerevisiae.
    Lipids. 1993 Oct;28(10):907-12 PMID: 8246690
  60. Immunofluorescence localization of the Saccharomyces cerevisiae CDC12 gene product to the vicinity of the 10-nm filaments in the mother-bud neck.
    Mol Cell Biol. 1987 Oct;7(10):3678-87 PMID: 3316985
  61. Transformation of intact yeast cells treated with alkali cations.
    J Bacteriol. 1983 Jan;153(1):163-8 PMID: 6336730
  62. Components required for cytokinesis are important for bud site selection in yeast.
    J Cell Biol. 1993 Jul;122(2):373-86 PMID: 8320260
Article Info
Journal
Molecular and cellular biology
Abbr.
Mol Cell Biol
ISSN
0270-7306
Published
1996-04-00
Pages
1857-70
Language
English
Region
United States
NLM ID
8109087
PMCID
PMC231173
Subset
IM
Grants
NIGMS NIH HHS · GM 07092 · United States
NIGMS NIH HHS · GM 16478 · United States
NIGMS NIH HHS · GM 31006 · United States
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]