Home LiteratureArticle Details
PMID: 11932398 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Molecular organization of Mason-Pfizer monkey virus capsids assembled from Gag polyprotein in Escherichia coli.

Journal of virology ·Vol. 76 ·No. 9 ·2002-05-00 ·Pages 4321-30

Nermut MV, Bron P, Thomas D, Rumlova M, Ruml T, Hunter E

Abstract

We describe the results of a study by electron microscopy and image processing of Gag protein shells-immature capsids--of Mason-Pfizer monkey virus assembled in Escherichia coli from two truncated forms of the Gag precursor: Deltap4Gag, in which the C-terminal p4Gag was deleted, and Pro(-)CA.NC, in which the N-terminal peptides and proline 1 of the CA domain were deleted. Negative staining of capsids revealed small patches of holes forming a trigonal or hexagonal pattern most clearly visible on occasional tubular forms. The center-to-center spacing of holes in the network was 7.1 nm in Deltap4Gag capsids and 7.4 nm in Pro(-)CA.NC capsids. Image processing of Deltap4Gag tubes revealed a hexagonal network of holes formed by six subunits with a single subunit shared between rings. This organization suggests that the six subunits are contributed by three trimers of the truncated Gag precursor. Similar molecular organization was observed in negatively stained Pro(-)CA.NC capsids. Shadowed replicas of freeze-etched capsids produced by either construct confirmed the presence of a hexagonal network of holes with a similar center-to-center spacing. We conclude that the basic building block of the cage-like network is a trimer of the Deltap4Gag or Pro(-)CA.NC domains. In addition, our results point to a key role of structurally constrained CA domain in the trimeric interaction of the Gag polyprotein.

MeSH Terms
Animals Capsid/genetics,metabolism,ultrastructure Escherichia coli/genetics,metabolism Gene Products, gag/genetics,metabolism Image Processing, Computer-Assisted Mason-Pfizer monkey virus/genetics,metabolism Microscopy, Electron Virus Assembly
Chemicals
Gene Products, gag
Authors & Affiliations
6 authors, click to expand affiliations / ORCID
Nermut Milan V
National Institute for Biological Standards and Control, South Mimms, Hertfordshire EN6 3QG, United Kingdom. [email protected]
Bron Patrick
Thomas Daniel
Rumlova Michaela
Ruml Tomas
Hunter Eric
References (56)
56 references, click to expand
  1. Head-to-tail dimers and interdomain flexibility revealed by the crystal structure of HIV-1 capsid protein (p24) complexed with a monoclonal antibody Fab.
    EMBO J. 1999 Mar 1;18(5):1124-36 PMID: 10064580
  2. Structures of the HIV-1 capsid protein dimerization domain at 2.6 A resolution.
    Acta Crystallogr D Biol Crystallogr. 1999 Jan;55(Pt 1):85-92 PMID: 10089398
  3. In vitro assembly properties of wild-type and cyclophilin-binding defective human immunodeficiency virus capsid proteins in the presence and absence of cyclophilin A.
    Virology. 1999 Apr 25;257(1):247-60 PMID: 10208938
  4. Mass determination of rous sarcoma virus virions by scanning transmission electron microscopy.
    J Virol. 1999 Aug;73(8):7050-5 PMID: 10400808
  5. Localization of actin in Moloney murine leukemia virus by immunoelectron microscopy.
    Virology. 1999 Jul 20;260(1):23-34 PMID: 10405353
  6. Separate assembly and transport domains within the Gag precursor of Mason-Pfizer monkey virus.
    J Virol. 1999 Oct;73(10):8073-82 PMID: 10482556
  7. Yeast Ty retrotransposons assemble into virus-like particles whose T-numbers depend on the C-terminal length of the capsid protein.
    J Mol Biol. 1999 Sep 10;292(1):65-73 PMID: 10493857
  8. Adding the third dimension to virus life cycles: three-dimensional reconstruction of icosahedral viruses from cryo-electron micrographs.
    Microbiol Mol Biol Rev. 1999 Dec;63(4):862-922, table of contents PMID: 10585969
  9. A conformational switch controlling HIV-1 morphogenesis.
    EMBO J. 2000 Jan 4;19(1):103-13 PMID: 10619849
  10. Atomic force microscopy and electron microscopy analysis of retrovirus Gag proteins assembled in vitro on lipid bilayers.
    Biophys J. 2000 Jan;78(1):373-84 PMID: 10620301
  11. Molecular modelling study of HIV p17gag (MA) protein shell utilising data from electron microscopy and X-ray crystallography.
    J Mol Biol. 2000 May 19;298(5):841-57 PMID: 10801353
  12. Minimal exclusion of plasma membrane proteins during retroviral envelope formation.
    Proc Natl Acad Sci U S A. 2000 Jun 20;97(13):7527-32 PMID: 10852949
  13. Assembly of retrovirus capsid-nucleocapsid proteins in the presence of membranes or RNA.
    J Virol. 2000 Aug;74(16):7431-41 PMID: 10906196
  14. Analysis of Mason-Pfizer monkey virus Gag domains required for capsid assembly in bacteria: role of the N-terminal proline residue of CA in directing particle shape.
    J Virol. 2000 Sep;74(18):8452-9 PMID: 10954545
  15. Three-dimensional organization of retroviral capsid proteins on a lipid monolayer.
    J Mol Biol. 2000 Sep 8;302(1):121-33 PMID: 10964565
  16. Image reconstructions of helical assemblies of the HIV-1 CA protein.
    Nature. 2000 Sep 21;407(6802):409-13 PMID: 11014200
  17. Organization of immature human immunodeficiency virus type 1.
    J Virol. 2001 Jan;75(2):759-71 PMID: 11134289
  18. Domains in the simian immunodeficiency virus gp41 cytoplasmic tail required for envelope incorporation into particles.
    Virology. 2001 May 10;283(2):253-61 PMID: 11336550
  19. Analysis of Mason-Pfizer monkey virus Gag particles by scanning transmission electron microscopy.
    J Virol. 2001 Oct;75(19):9543-8 PMID: 11533218
  20. Electron microscopy of tumor cells and tumor viruses; a review.
    Cancer Res. 1958 Jun;18(5):491-509 PMID: 13547041
  21. Cellular proteins bound to immunodeficiency viruses: implications for pathogenesis and vaccines.
    Science. 1992 Dec 18;258(5090):1935-8 PMID: 1470916
  22. Assembly of recombinant human immunodeficiency virus type 1 capsid protein in vitro.
    J Virol. 1992 Aug;66(8):4874-83 PMID: 1629958
  23. Nucleotide sequence of Mason-Pfizer monkey virus: an immunosuppressive D-type retrovirus.
    Cell. 1986 May 9;45(3):375-85 PMID: 2421920
  24. Electron microscopy of human immunodeficiency virus.
    J Gen Virol. 1988 Oct;69 ( Pt 10):2455-69 PMID: 2459300
  25. Assembly and release of HIV-1 precursor Pr55gag virus-like particles from recombinant baculovirus-infected insect cells.
    Cell. 1989 Oct 6;59(1):103-12 PMID: 2676191
  26. Introduction to the computer image processing of electron micrographs of two-dimensionally ordered biological structures.
    J Electron Microsc Tech. 1988 Aug;9(4):301-24 PMID: 3058894
  27. Freeze-fracturing of monolayers (capillary layers) of cell, membranes and viruses: some technical considerations.
    J Microsc. 1977 Jul;110(2):121-32 PMID: 335072
  28. Fine structure of human immunodeficiency virus (HIV) and immunolocalization of structural proteins.
    Virology. 1987 Jan;156(1):171-6 PMID: 3643678
  29. Regulation of glutamine synthetase. XII. Electron microscopy of the enzyme from Escherichia coli.
    Biochemistry. 1968 Jun;7(6):2143-52 PMID: 4873173
  30. Crystal structure of SIV matrix antigen and implications for virus assembly.
    Nature. 1995 Dec 14;378(6558):743-7 PMID: 7501025
  31. Self-assembly in vitro of purified CA-NC proteins from Rous sarcoma virus and human immunodeficiency virus type 1.
    J Virol. 1995 Oct;69(10):6487-97 PMID: 7666550
  32. Efficient in vivo and in vitro assembly of retroviral capsids from Gag precursor proteins expressed in bacteria.
    J Virol. 1995 Feb;69(2):1093-8 PMID: 7815488
  33. Structural interactions between retroviral Gag proteins examined by cysteine cross-linking.
    J Virol. 1995 Feb;69(2):1150-9 PMID: 7815493
  34. Three-dimensional structure of hepatitis B virus core particles determined by electron cryomicroscopy.
    Cell. 1994 Jun 17;77(6):943-50 PMID: 8004680
  35. Analysis of electron microscope images and electron diffraction patterns of thin crystals of phi 29 connectors in ice.
    J Mol Biol. 1994 Jul 22;240(4):281-7 PMID: 8035455
  36. Fullerene-like organization of HIV gag-protein shell in virus-like particles produced by recombinant baculovirus.
    Virology. 1994 Jan;198(1):288-96 PMID: 8259664
  37. Functional implications of protein-protein interactions in icosahedral viruses.
    Proc Natl Acad Sci U S A. 1996 Jan 9;93(1):27-33 PMID: 8552620
  38. Crystal structures of the trimeric human immunodeficiency virus type 1 matrix protein: implications for membrane association and assembly.
    Proc Natl Acad Sci U S A. 1996 Apr 2;93(7):3099-104 PMID: 8610175
  39. Synthesis and assembly of retrovirus Gag precursors into immature capsids in vitro.
    J Virol. 1996 Jun;70(6):3706-15 PMID: 8648705
  40. MRC image processing programs.
    J Struct Biol. 1996 Jan-Feb;116(1):9-16 PMID: 8742717
  41. Comparative morphology and structural classification of retroviruses.
    Curr Top Microbiol Immunol. 1996;214:1-24 PMID: 8791723
  42. Crystal structure of human cyclophilin A bound to the amino-terminal domain of HIV-1 capsid.
    Cell. 1996 Dec 27;87(7):1285-94 PMID: 8980234
  43. Structural analysis of membrane-bound retrovirus capsid proteins.
    EMBO J. 1997 Mar 17;16(6):1199-213 PMID: 9135137
  44. In vitro assembly of virus-like particles with Rous sarcoma virus Gag deletion mutants: identification of the p10 domain as a morphological determinant in the formation of spherical particles.
    J Virol. 1997 Jun;71(6):4425-35 PMID: 9151833
  45. Cryo-electron microscopy structure of yeast Ty retrotransposon virus-like particles.
    J Virol. 1997 Sep;71(9):6863-8 PMID: 9261411
  46. The three-dimensional solution structure of the matrix protein from the type D retrovirus, the Mason-Pfizer monkey virus, and implications for the morphology of retroviral assembly.
    EMBO J. 1997 Oct 1;16(19):5819-26 PMID: 9312040
  47. Cryo-electron microscopy reveals ordered domains in the immature HIV-1 particle.
    Curr Biol. 1997 Oct 1;7(10):729-38 PMID: 9368755
  48. Membrane-induced alterations in HIV-1 Gag and matrix protein-protein interactions.
    J Mol Biol. 1998 Mar 27;277(2):161-9 PMID: 9514761
  49. Organization of HIV-1 capsid proteins on a lipid monolayer.
    J Biol Chem. 1998 Mar 27;273(13):7177-80 PMID: 9516405
  50. N-Terminal extension of human immunodeficiency virus capsid protein converts the in vitro assembly phenotype from tubular to spherical particles.
    J Virol. 1998 Jun;72(6):4798-810 PMID: 9573245
  51. Recent advances and remaining problems in HIV assembly.
    AIDS. 1998;12 Suppl A:S5-16 PMID: 9632979
  52. Supramolecular organization of immature and mature murine leukemia virus revealed by electron cryo-microscopy: implications for retroviral assembly mechanisms.
    Proc Natl Acad Sci U S A. 1998 Jun 23;95(13):7299-304 PMID: 9636143
  53. Detection of a trimeric human immunodeficiency virus type 1 Gag intermediate is dependent on sequences in the matrix protein, p17.
    J Virol. 1998 Sep;72(9):7659-63 PMID: 9696871
  54. HIV-1 gag proteins: diverse functions in the virus life cycle.
    Virology. 1998 Nov 10;251(1):1-15 PMID: 9813197
  55. Further evidence for hexagonal organization of HIV gag protein in prebudding assemblies and immature virus-like particles.
    J Struct Biol. 1998 Oct;123(2):143-9 PMID: 9843668
  56. Structural biology of HIV.
    J Mol Biol. 1999 Jan 8;285(1):1-32 PMID: 9878383
Article Info
Journal
Journal of virology
Abbr.
J Virol
ISSN
0022-538X
Published
2002-05-00
Pages
4321-30
Language
English
Region
United States
NLM ID
0113724
PMCID
PMC155098
Subset
IM
Grants
Wellcome Trust · United Kingdom
FIC NIH HHS · T37 TW000050 · United States
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]