Home LiteratureArticle Details
PMID: 1542567 Published · ppublish English Journal Article

Cloning and expression of the HpaI restriction-modification genes.

Nucleic acids research ·Vol. 20 ·No. 4 ·1992-02-25 ·Pages 705-9

Ito H, Shimato H, Sadaoka A, Kotani H, Kimizuka F, Kato I

Abstract

The genes from Haemophilus parainfluenzae encoding the HpaI restriction-modification system were cloned and expressed in Escherichia coli. From the DNA sequence, we predicted the HpaI endonuclease (R.HpaI) to have 254 amino acid residues (Mr 29,630) and the HpaI methyltransferase (M.HpaI) to have 314 amino acid residues (37,390). The R.HpaI and M.HpaI genes overlapped by 16 base pairs on the chromosomal DNA. The genes had the same orientation. The clone, named E. coli HB101-HPA2, overproduced R.HpaI. R.HpaI activity from the clone was 100-fold that from H. parainfluenzae. The amino acid sequence of M.HpaI was compared with those of other type II methyltransferases.

MeSH Terms
Amino Acid Sequence Base Sequence Blotting, Southern Cloning, Molecular Deoxyribonucleases, Type II Site-Specific/chemistry,genetics Gene Expression Haemophilus/enzymology,genetics Molecular Sequence Data Restriction Mapping Site-Specific DNA-Methyltransferase (Adenine-Specific)/chemistry,genetics
Chemicals
DNA modification methylase HpaI Site-Specific DNA-Methyltransferase (Adenine-Specific) endodeoxyribonuclease HpaI Deoxyribonucleases, Type II Site-Specific
Authors & Affiliations
6 authors, click to expand affiliations / ORCID
Ito H
Bioproducts Development Center, Takara Shuzo Co., Ltd, Shiga, Japan.
Shimato H
Sadaoka A
Kotani H
Kimizuka F
Kato I
References (40)
40 references, click to expand
  1. Cleavage of structural proteins during the assembly of the head of bacteriophage T4.
    Nature. 1970 Aug 15;227(5259):680-5 PMID: 5432063
  2. A new method for isolation of a restriction enzyme from Hemophilus parainfluenzae.
    Biochem Biophys Res Commun. 1974 Jun 4;58(3):586-96 PMID: 4599683
  3. Cloning and expression of the Pst I restriction-modification system in Escherichia coli.
    Proc Natl Acad Sci U S A. 1981 Mar;78(3):1503-7 PMID: 6262807
  4. Revised sequence of the tetracycline-resistance gene of pBR322.
    Gene. 1983 May-Jun;22(2-3):277-80 PMID: 6307828
  5. Studies on transformation of Escherichia coli with plasmids.
    J Mol Biol. 1983 Jun 5;166(4):557-80 PMID: 6345791
  6. Purification and properties of the Hpa I methylase.
    Nucleic Acids Res. 1982 Oct 25;10(20):6511-9 PMID: 6983681
  7. Detection of specific sequences among DNA fragments separated by gel electrophoresis.
    J Mol Biol. 1975 Nov 5;98(3):503-17 PMID: 1195397
  8. Characterization of the cloned BamHI restriction modification system: its nucleotide sequence, properties of the methylase, and expression in heterologous hosts.
    Nucleic Acids Res. 1991 Feb 25;19(4):841-50 PMID: 1901989
  9. Cloning and nucleotide sequence of the gene encoding the Ecal DNA methyltransferase.
    Nucleic Acids Res. 1990 Jan 25;18(2):355-9 PMID: 2183182
  10. Nucleotide sequence of the metH gene of Escherichia coli K-12 and comparison with that of Salmonella typhimurium LT2.
    Gene. 1990 Mar 1;87(1):15-21 PMID: 2185137
  11. Evolution of type II DNA methyltransferases. A gene duplication model.
    J Mol Biol. 1989 Mar 20;206(2):313-21 PMID: 2541254
  12. Sequence motifs characteristic of DNA[cytosine-N4]methyltransferases: similarity to adenine and cytosine-C5 DNA-methylases.
    Nucleic Acids Res. 1989 Dec 11;17(23):9823-32 PMID: 2690010
  13. Cytosine-specific type II DNA methyltransferases. A conserved enzyme core with variable target-recognizing domains.
    J Mol Biol. 1989 Mar 20;206(2):305-12 PMID: 2716049
  14. Cloning, sequencing and expression of the Taq I restriction-modification system.
    Nucleic Acids Res. 1987 Dec 10;15(23):9781-96 PMID: 2827113
  15. Nucleotide sequence of the BsuRI restriction-modification system.
    Nucleic Acids Res. 1985 Sep 25;13(18):6403-21 PMID: 2997708
  16. Genetic basis of the complementary DpnI and DpnII restriction systems of S. pneumoniae: an intercellular cassette mechanism.
    Cell. 1986 Sep 26;46(7):993-1000 PMID: 3019562
  17. Detection of two restriction endonuclease activities in Haemophilus parainfluenzae using analytical agarose--ethidium bromide electrophoresis.
    Biochemistry. 1973 Jul 31;12(16):3055-63 PMID: 4354250
  18. A complementation analysis of the restriction and modification of DNA in Escherichia coli.
    J Mol Biol. 1969 May 14;41(3):459-72 PMID: 4896022
  19. Sequence analysis of the DNA encoding the Eco RI endonuclease and methylase.
    J Biol Chem. 1981 Mar 10;256(5):2143-53 PMID: 6257703
  20. Plasmid vectors for high-efficiency expression controlled by the PL promoter of coliphage lambda.
    Gene. 1981 Oct;15(1):81-93 PMID: 6271633
  21. Structure and expression of the dnaQ mutator and the RNase H genes of Escherichia coli: overlap of the promoter regions.
    Proc Natl Acad Sci U S A. 1983 Dec;80(23):7137-41 PMID: 6316347
  22. Construction and characterization of amplifiable multicopy DNA cloning vehicles derived from the P15A cryptic miniplasmid.
    J Bacteriol. 1978 Jun;134(3):1141-56 PMID: 149110
  23. DNA sequencing with chain-terminating inhibitors.
    Proc Natl Acad Sci U S A. 1977 Dec;74(12):5463-7 PMID: 271968
  24. Construction and characterization of new cloning vehicles. II. A multipurpose cloning system.
    Gene. 1977;2(2):95-113 PMID: 344137
  25. A rapid alkaline extraction procedure for screening recombinant plasmid DNA.
    Nucleic Acids Res. 1979 Nov 24;7(6):1513-23 PMID: 388356
  26. Cloning and nucleotide sequences of the AccI restriction-modification genes in Acinetobacter calcoaceticus.
    Agric Biol Chem. 1991 Jun;55(6):1553-9 PMID: 1368703
  27. Organization of restriction-modification systems.
    Nucleic Acids Res. 1991 May 25;19(10):2539-66 PMID: 2041731
  28. Restriction enzymes and their isoschizomers.
    Nucleic Acids Res. 1990 Apr 25;18 Suppl:2331-65 PMID: 2159140
  29. Cloning and characterization of the HpaII methylase gene.
    Nucleic Acids Res. 1990 Mar 25;18(6):1377-83 PMID: 2183189
  30. Cloning, nucleotide sequence, and expression of the HincII restriction-modification system.
    Nucleic Acids Res. 1990 Jul 11;18(13):3903-11 PMID: 2374714
  31. Sequence, internal homology and high-level expression of the gene for a DNA-(cytosine N4)-methyltransferase, M.Pvu II.
    Nucleic Acids Res. 1989 Jun 12;17(11):4161-75 PMID: 2662138
  32. Cloning, characterization and heterologous expression of the SmaI restriction-modification system.
    Nucleic Acids Res. 1989 Dec 11;17(23):9783-96 PMID: 2690008
  33. Purification, cloning and sequence analysis of RsrI DNA methyltransferase: lack of homology between two enzymes, RsrI and EcoRI, that methylate the same nucleotide in identical recognition sequences.
    Nucleic Acids Res. 1989 Dec 25;17(24):10403-25 PMID: 2690017
  34. The fokI restriction-modification system. I. Organization and nucleotide sequences of the restriction and modification genes.
    J Biol Chem. 1989 Apr 5;264(10):5751-6 PMID: 2784436
  35. Nucleotide sequence of the DdeI restriction-modification system and characterization of the methylase protein.
    Nucleic Acids Res. 1987 Oct 26;15(20):8249-66 PMID: 2823226
  36. Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors.
    Gene. 1985;33(1):103-19 PMID: 2985470
  37. Nucleotide sequence of the PaeR7 restriction/modification system and partial characterization of its protein products.
    Nucleic Acids Res. 1985 Dec 9;13(23):8441-61 PMID: 3001639
  38. Molecular cloning and characterization of the gene encoding the DNA methyltransferase, M.CviBIII, from Chlorella virus NC-1A.
    Nucleic Acids Res. 1987 Dec 10;15(23):9807-23 PMID: 3320956
  39. Sequence from picomole quantities of proteins electroblotted onto polyvinylidene difluoride membranes.
    J Biol Chem. 1987 Jul 25;262(21):10035-8 PMID: 3611052
  40. Overproduction of transcription termination factor Rho in Escherichia coli.
    Gene. 1984 Jul-Aug;29(1-2):199-209 PMID: 6092221
Article Info
Journal
Nucleic acids research
Abbr.
Nucleic Acids Res
ISSN
0305-1048
Published
1992-02-25
Pages
705-9
Language
English
Region
England
NLM ID
0411011
PMCID
PMC312008
Subset
IM
Databases
GENBANK
D01166
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]