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PMID: 2307659 Published · ppublish English Comparative Study Journal Article Research Support, Non-U.S. Gov't

Molecular cloning, expression, and characterization of endo-beta-1,4-glucanase genes from Bacillus polymyxa and Bacillus circulans.

Journal of bacteriology ·Vol. 172 ·No. 3 ·1990-03-00 ·Pages 1576-86

Baird SD, Johnson DA, Seligy VL

Abstract

Endo-beta-1,4-glucanase genes from Bacillus circulans and from B. polymyxa were cloned by direct expression by using bacteriophage M13mp9 as the vector. The enzymatic activity of the gene products was detected by using either the Congo red assay or hydroxyethyl cellulose dyed with Ostazin Brilliant Red H-3B. The B. circulans and B. subtilis PAP115 endo-beta-1,4-glucanase genes were shown to be homologous by the use of restriction endonuclease site mapping, DNA-DNA hybridization, S1 nuclease digestion after heteroduplex formation, and sodium dodecyl sulfate-polyacrylamide gel electrophoresis of the protein products. Analysis of the nucleotide sequence of 3.1 kilobase pairs of cloned B. polymyxa DNA revealed two convergently transcribed open reading frames (ORFs) consisting of 398 codons (endoglucanase) and 187 codons (ORF2) and separated by 374 nucleotides. The coding region of the B. polymyxa endoglucanase gene would theoretically produce a 44-kilodalton preprotein. Expression of the B. polymyxa endoglucanase in Escherichia coli was due to a fusion of the endoglucanase gene at codon 30 with codon 9 of the lacZ alpha-peptide gene. The B. polymyxa endoglucanase has 34% amino acid similarity to the Clostridium thermocellum celB endoglucanase sequence but very little similarity to endoglucanases from other Bacillus species. ORF2 has 28% amino acid similarity to the NH2-terminal half of the E. coli lac repressor protein, which is responsible for DNA binding.

MeSH Terms
Amino Acid Sequence Bacillus/enzymology,genetics Base Sequence Cellulase/genetics Cloning, Molecular/methods Coliphages/genetics DNA, Bacterial/genetics,isolation & purification Gene Expression Genes, Bacterial Genotype Molecular Sequence Data Sequence Homology, Nucleic Acid Species Specificity Transcription, Genetic
Chemicals
DNA, Bacterial Cellulase
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Baird S D
Department of Biology, University of Ottawa, Ontario, Canada.
Johnson D A
Seligy V L
References (43)
43 references, click to expand
  1. Differential transcription of the bla regulatory region during induction of beta-lactamase in Bacillus licheniformis.
    FEBS Lett. 1988 Jan 18;227(1):61-5 PMID: 2448167
  2. A rapid single-stranded cloning strategy for producing a sequential series of overlapping clones for use in DNA sequencing: application to sequencing the corn mitochondrial 18 S rDNA.
    Plasmid. 1985 Jan;13(1):31-40 PMID: 3991809
  3. Molecular cloning of Erwinia chrysanthemi pectinase and cellulase structural genes.
    EMBO J. 1985 Mar;4(3):781-5 PMID: 16453606
  4. Detection of cellulase activity in polyacrylamide gels using Congo red-stained agar replicas.
    Anal Biochem. 1983 Jun;131(2):333-6 PMID: 6193735
  5. Cleavage of structural proteins during the assembly of the head of bacteriophage T4.
    Nature. 1970 Aug 15;227(5259):680-5 PMID: 5432063
  6. Studies on transformation of Escherichia coli with plasmids.
    J Mol Biol. 1983 Jun 5;166(4):557-80 PMID: 6345791
  7. Mapping of mRNA encoding endoglucanase A from Clostridium thermocellum.
    Mol Gen Genet. 1986 Feb;202(2):251-4 PMID: 3010048
  8. Affinities of tight-binding lactose repressors for wild-type and pseudo-operators.
    J Mol Biol. 1987 Jun 5;195(3):495-504 PMID: 3309337
  9. Molecular cloning of Clostridium thermocellum DNA and the expression of further novel endo-beta-1,4-glucanase genes in Escherichia coli.
    J Gen Microbiol. 1987 May;133(5):1297-307 PMID: 3309181
  10. Isolation of Endoglucanase Genes from Pseudomonas fluorescens subsp. cellulosa and a Pseudomonas sp.
    Appl Environ Microbiol. 1986 Jun;51(6):1367-9 PMID: 16347092
  11. Endo-beta-1,4-glucanase gene of Bacillus subtilis DLG.
    J Bacteriol. 1987 May;169(5):2017-25 PMID: 3106328
  12. Sequence of the cellulase gene of Clostridium thermocellum coding for endoglucanase B.
    Nucleic Acids Res. 1986 Feb 25;14(4):1791-9 PMID: 3453102
  13. E. coli RNA polymerase interacts homologously with two different promoters.
    Cell. 1980 Jun;20(2):269-81 PMID: 6248238
  14. Cloning and nucleotide sequence of the gene coding for enzymatically active fragments of the Bacillus polymyxa beta-amylase.
    J Bacteriol. 1987 Apr;169(4):1564-70 PMID: 2435707
  15. Nucleotide sequences of two cellulase genes from alkalophilic Bacillus sp. strain N-4 and their strong homology.
    J Bacteriol. 1986 Nov;168(2):479-85 PMID: 3782013
  16. In vivo cloning of the pectate lyase and cellulase genes of Erwinia chrysanthemi.
    EMBO J. 1985 Mar;4(3):787-92 PMID: 16453607
  17. Construction of a family of universal expression plasmid vectors.
    Gene. 1984 Oct;30(1-3):247-50 PMID: 6096218
  18. Structure of a Bacillus subtilis endo-beta-1,4-glucanase gene.
    Nucleic Acids Res. 1986 Nov 25;14(22):9159-70 PMID: 3024130
  19. New M13 vectors for cloning.
    Methods Enzymol. 1983;101:20-78 PMID: 6310323
  20. The pUC plasmids, an M13mp7-derived system for insertion mutagenesis and sequencing with synthetic universal primers.
    Gene. 1982 Oct;19(3):259-68 PMID: 6295879
  21. Rapid transfer of DNA from agarose gels to nylon membranes.
    Nucleic Acids Res. 1985 Oct 25;13(20):7207-21 PMID: 4059056
  22. Cloning and expression of two cellulase genes of Clostridium cellulolyticum in Escherichia coli.
    Gene. 1988 May 15;65(1):51-8 PMID: 2840356
  23. Detection of specific sequences among DNA fragments separated by gel electrophoresis.
    J Mol Biol. 1975 Nov 5;98(3):503-17 PMID: 1195397
  24. Promoter recognition and promoter strength in the Escherichia coli system.
    EMBO J. 1987 Oct;6(10):3139-44 PMID: 2961560
  25. Purification and properties of an endo-beta-1,4-glucanase from Clostridium thermocellum.
    Biochimie. 1981 Jul;63(7):629-39 PMID: 7284473
  26. PREPARATION OF TRANSFORMING DEOXYRIBONUCLEIC ACID BY PHENOL TREATMENT.
    Biochim Biophys Acta. 1963 Aug 20;72:619-29 PMID: 14071565
  27. Structure and function of E. coli promoter DNA.
    CRC Crit Rev Biochem. 1987;22(3):181-219 PMID: 3315462
  28. Use of Congo red-polysaccharide interactions in enumeration and characterization of cellulolytic bacteria from the bovine rumen.
    Appl Environ Microbiol. 1982 Apr;43(4):777-80 PMID: 7081984
  29. Cloning of the cellulase gene from Ruminococcus albus and its expression in Escherichia coli.
    Appl Environ Microbiol. 1988 Jun;54(6):1511-5 PMID: 2843095
  30. Cloning and expression in Escherichia coli of a cellulase gene from Ruminococcus flavefaciens.
    J Bacteriol. 1987 Apr;169(4):1760-2 PMID: 3549703
  31. A convenient and adaptable package of computer programs for DNA and protein sequence management, analysis and homology determination.
    Nucleic Acids Res. 1984 Jan 11;12(1 Pt 2):643-55 PMID: 6320100
  32. Soluble chromogenic substrates for the assay of endo-1,4-beta-xylanases and endo-1,4-beta-glucanases.
    Anal Biochem. 1985 Jan;144(1):142-6 PMID: 3838626
  33. Nucleotide sequence of a cellulase gene of Bacillus subtilis.
    Eur J Biochem. 1987 Apr 15;164(2):317-20 PMID: 3106035
  34. Nucleotide sequence of a Bacillus circulans xylanase gene.
    Nucleic Acids Res. 1988 Jul 25;16(14B):7187 PMID: 3405767
  35. A reliable method for the recovery of DNA fragments from agarose and acrylamide gels.
    Anal Biochem. 1981 Apr;112(2):295-8 PMID: 6266279
  36. Bacillus subtilis beta-1,4-endoglucanase products from intact and truncated genes are secreted into the extracellular medium by Escherichia coli.
    Appl Environ Microbiol. 1988 Sep;54(9):2287-92 PMID: 3142357
  37. Regulation, initiation, and termination of the cenA and cex transcripts of Cellulomonas fimi.
    J Bacteriol. 1987 Feb;169(2):646-53 PMID: 3804971
  38. Molecular cloning and expression of cellulase genes of alkalophilic Bacillus sp. strain N-4 in Escherichia coli.
    J Bacteriol. 1984 May;158(2):503-6 PMID: 6327607
  39. Buffer gradient gels and 35S label as an aid to rapid DNA sequence determination.
    Proc Natl Acad Sci U S A. 1983 Jul;80(13):3963-5 PMID: 6575390
  40. Molecular cloning of an endoglucanase gene from an alkalophilic Bacillus sp. and its expression in Escherichia coli.
    Appl Environ Microbiol. 1987 Nov;53(11):2656-9 PMID: 2827572
  41. Two RNA polymerase sigma factors from Bacillus subtilis discriminate between overlapping promoters for a developmentally regulated gene.
    Nature. 1983 Apr 28;302(5911):800-4 PMID: 6405278
  42. A convenient and adaptable package of DNA sequence analysis programs for microcomputers.
    Nucleic Acids Res. 1982 Jan 11;10(1):51-9 PMID: 6278412
  43. Los Alamos sequence analysis package for nucleic acids and proteins.
    Nucleic Acids Res. 1982 Jan 11;10(1):183-96 PMID: 6174934
Article Info
Journal
Journal of bacteriology
Abbr.
J Bacteriol
ISSN
0021-9193
Published
1990-03-00
Pages
1576-86
Language
English
Region
United States
NLM ID
2985120R
PMCID
PMC208635
Subset
IM
Databases
GENBANK
M33791
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