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PMID: 2335815 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Structural requirements in the herpes simplex virus type 1 transactivator Vmw65 for interaction with the cellular octamer-binding protein and target TAATGARAT sequences.

Journal of virology ·Vol. 64 ·No. 6 ·1990-06-00 ·Pages 2716-24

Greaves RF, O'Hare P

Abstract

Herpes simplex virus type 1 virion protein Vmw65 forms a complex (TRF.C) with TAATGARAT sequences and the cellular transcription factor oct-1, which has been implicated as an intermediate in the activation of gene expression by Vmw65. To examine structural requirements within Vmw65 for this interaction, we analyzed extracts of transfected cells that express mutant Vmw65 proteins by gel retardation assay and identified two regions in the primary sequence of Vmw65 which are necessary for in vitro assembly of TRF.C. The amino-terminal boundary for complex assembly and trans activation mapped between residues 49 and 75. At the carboxyl terminus, deletion as far as residue 388 did not affect in vitro TRF.C assembly, although trans-activating activity was abolished. Deletion beyond residue 388 rapidly impaired the ability of the protein to participate in the TRF.C complex, such that a truncated mutant of 380 residues was completely inactive. These requirements towards the carboxyl terminus overlap a region of strong local sequence similarity between Vmw65 and terminal protein p3 of bacteriophage phi 29. Although substitution of corresponding p3 residues into Vmw65 failed to produce a functional chimera, site-directed mutagenesis within the region of similarity identified a number of single-point mutant proteins which were completely deficient for TRF.C formation. These mutant proteins were also unable to trans activate expression from immediate-early promoters, despite the integrity of the acidic carboxyl terminus. The extreme sensitivity of both TRF.C formation and trans activation to single-residue substitutions within this region of Vmw65 suggests that it is directly involved in the protein-protein or protein-DNA interactions required for assembly of a transcriptional complex containing oct-1.

MeSH Terms
Amino Acid Sequence Animals Base Sequence Binding Sites Cell Line Chromosome Deletion DNA-Binding Proteins/metabolism Genetic Vectors HIV-1/genetics Host Cell Factor C1 Molecular Sequence Data Mutation Octamer Transcription Factor-1 Oligonucleotide Probes Plasmids Restriction Mapping Trans-Activators/genetics,metabolism Transcription Factors/metabolism Transcriptional Activation Transfection
Chemicals
DNA-Binding Proteins Host Cell Factor C1 Octamer Transcription Factor-1 Oligonucleotide Probes Trans-Activators Transcription Factors
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Greaves R F
Marie Curie Research Institute, Oxted, Surrey, United Kingdom.
O'Hare P
References (51)
51 references, click to expand
  1. DNA sequence of the herpes simplex virus type 1 gene whose product is responsible for transcriptional activation of immediate early promoters.
    Nucleic Acids Res. 1985 Nov 11;13(21):7865-79 PMID: 2999707
  2. Interference with the assembly of a virus-host transcription complex by peptide competition.
    Nature. 1990 Mar 15;344(6263):257-9 PMID: 2156166
  3. Analysis of DNA sequences which regulate the transcription of herpes simplex virus immediate early gene 3: DNA sequences required for enhancer-like activity and response to trans-activation by a virion polypeptide.
    Nucleic Acids Res. 1986 Jan 24;14(2):929-43 PMID: 3003700
  4. Identification of the human papilloma virus-1a E4 gene products.
    EMBO J. 1986 Feb;5(2):355-62 PMID: 3011404
  5. The complete DNA sequence of varicella-zoster virus.
    J Gen Virol. 1986 Sep;67 ( Pt 9):1759-816 PMID: 3018124
  6. Nuclear factor III, a novel sequence-specific DNA-binding protein from HeLa cells stimulating adenovirus DNA replication.
    Nature. 1986 Aug 14-20;322(6080):656-9 PMID: 3748145
  7. Interaction of a common factor with conserved promoter and enhancer sequences in histone H2B, immunoglobulin, and U2 small nuclear RNA (snRNA) genes.
    Proc Natl Acad Sci U S A. 1986 Sep;83(17):6382-6 PMID: 3462701
  8. Trans-activation of human immunodeficiency virus occurs via a bimodal mechanism.
    Cell. 1986 Sep 26;46(7):973-82 PMID: 3530501
  9. Comparison of upstream sequence requirements for positive and negative regulation of a herpes simplex virus immediate-early gene by three virus-encoded trans-acting factors.
    J Virol. 1987 Jan;61(1):190-9 PMID: 3023697
  10. A transcription factor which binds to the enhancers of SV40, immunoglobulin heavy chain and U2 snRNA genes.
    Nature. 1987 Jan 15-21;325(6101):268-72 PMID: 3027566
  11. The 65,000-Mr DNA-binding and virion trans-inducing proteins of herpes simplex virus type 1.
    J Virol. 1987 Aug;61(8):2428-37 PMID: 3037105
  12. High-efficiency transformation of mammalian cells by plasmid DNA.
    Mol Cell Biol. 1987 Aug;7(8):2745-52 PMID: 3670292
  13. Binding of the virion protein mediating alpha gene induction in herpes simplex virus 1-infected cells to its cis site requires cellular proteins.
    Proc Natl Acad Sci U S A. 1987 Oct;84(20):7061-5 PMID: 2823252
  14. A 100-kD HeLa cell octamer binding protein (OBP100) interacts differently with two separate octamer-related sequences within the SV40 enhancer.
    Genes Dev. 1987 Dec;1(10):1147-60 PMID: 2828167
  15. A complex formed between cell components and an HSV structural polypeptide binds to a viral immediate early gene regulatory DNA sequence.
    Cell. 1988 Feb 12;52(3):425-34 PMID: 2830986
  16. Herpes simplex virus regulatory elements and the immunoglobulin octamer domain bind a common factor and are both targets for virion transactivation.
    Cell. 1988 Feb 12;52(3):435-45 PMID: 2830987
  17. Differentiation and DNA contact points of host proteins binding at the cis site for virion-mediated induction of alpha genes of herpes simplex virus 1.
    J Virol. 1988 Apr;62(4):1145-57 PMID: 2831377
  18. Initiation of phage phi 29 DNA replication by mutants with deletions at the amino end of the terminal protein.
    Gene. 1988;63(1):113-21 PMID: 3133284
  19. Transcription factor OTF-1 is functionally identical to the DNA replication factor NF-III.
    Science. 1988 Sep 2;241(4870):1210-3 PMID: 3413485
  20. Functional dissection of VP16, the trans-activator of herpes simplex virus immediate early gene expression.
    Genes Dev. 1988 Jun;2(6):718-29 PMID: 2843425
  21. Expression of a truncated viral trans-activator selectively impedes lytic infection by its cognate virus.
    Nature. 1988 Sep 29;335(6189):452-4 PMID: 2843776
  22. GAL4-VP16 is an unusually potent transcriptional activator.
    Nature. 1988 Oct 6;335(6190):563-4 PMID: 3047590
  23. Mutational analysis of the herpes simplex virus type 1 trans-inducing factor Vmw65.
    J Gen Virol. 1988 Oct;69 ( Pt 10):2595-605 PMID: 2844968
  24. OBP100 binds remarkably degenerate octamer motifs through specific interactions with flanking sequences.
    Genes Dev. 1988 Nov;2(11):1400-13 PMID: 2850260
  25. Separation of requirements for protein-DNA complex assembly from those for functional activity in the herpes simplex virus regulatory protein Vmw65.
    J Virol. 1989 Apr;63(4):1641-50 PMID: 2538647
  26. Single-stranded DNA 'blue' T7 promoter plasmids: a versatile tandem promoter system for cloning and protein engineering.
    Protein Eng. 1986 Oct-Nov;1(1):67-74 PMID: 3507689
  27. Cleavage of structural proteins during the assembly of the head of bacteriophage T4.
    Nature. 1970 Aug 15;227(5259):680-5 PMID: 5432063
  28. Regulation of herpesvirus macromolecular synthesis. I. Cascade regulation of the synthesis of three groups of viral proteins.
    J Virol. 1974 Jul;14(1):8-19 PMID: 4365321
  29. Analysis of the accuracy and implications of simple methods for predicting the secondary structure of globular proteins.
    J Mol Biol. 1978 Mar 25;120(1):97-120 PMID: 642007
  30. SV40-transformed simian cells support the replication of early SV40 mutants.
    Cell. 1981 Jan;23(1):175-82 PMID: 6260373
  31. Regulation of alpha genes of herpes simplex virus: expression of chimeric genes produced by fusion of thymidine kinase with alpha gene promoters.
    Cell. 1981 May;24(2):555-65 PMID: 6263501
  32. "Western blotting": electrophoretic transfer of proteins from sodium dodecyl sulfate--polyacrylamide gels to unmodified nitrocellulose and radiographic detection with antibody and radioiodinated protein A.
    Anal Biochem. 1981 Apr;112(2):195-203 PMID: 6266278
  33. DNA sequence analysis of an immediate-early gene region of the herpes simplex virus type 1 genome (map coordinates 0.950 to 0.978).
    J Gen Virol. 1982 Sep;62 (Pt 1):1-15 PMID: 6290591
  34. Nucleotide sequence of the early genes 3 and 4 of bacteriophage phi 29.
    Nucleic Acids Res. 1982 Oct 11;10(19):5785-98 PMID: 6292852
  35. Structural features of the herpes simplex virus alpha gene 4, 0, and 27 promoter-regulatory sequences which confer alpha regulation on chimeric thymidine kinase genes.
    J Virol. 1982 Dec;44(3):939-49 PMID: 6294341
  36. Monoclonal antibodies to three non-glycosylated antigens of herpes simplex virus type 2.
    J Gen Virol. 1982 Dec;63(2):297-305 PMID: 6296279
  37. Characterization of the herpes simplex virion-associated factor responsible for the induction of alpha genes.
    J Virol. 1983 May;46(2):371-7 PMID: 6302308
  38. Immediate-early mRNA-2 of herpes simplex viruses types 1 and 2 is unspliced: conserved sequences around the 5' and 3' termini correspond to transcription regulatory signals.
    Nucleic Acids Res. 1983 Sep 24;11(18):6271-87 PMID: 6312416
  39. Easy identification of cDNA clones.
    EMBO J. 1983;2(10):1791-4 PMID: 6315402
  40. Two protein-binding sites in chromatin implicated in the activation of heat-shock genes.
    Nature. 1984 May 17-23;309(5965):229-34 PMID: 6325944
  41. Analysis of DNA sequences which regulate the transcription of a herpes simplex virus immediate early gene.
    J Virol. 1984 Jun;50(3):708-16 PMID: 6328000
  42. Separation of sequences defining basal expression from those conferring alpha gene recognition within the regulatory domains of herpes simplex virus 1 alpha genes.
    Proc Natl Acad Sci U S A. 1984 Jul;81(13):4065-9 PMID: 6330737
  43. Expression of recombinant genes containing herpes simplex virus delayed-early and immediate-early regulatory regions and trans activation by herpesvirus infection.
    J Virol. 1984 Nov;52(2):522-31 PMID: 6092673
  44. Identification of herpes simplex virus DNA sequences which encode a trans-acting polypeptide responsible for stimulation of immediate early transcription.
    J Mol Biol. 1984 Nov 25;180(1):1-19 PMID: 6096556
  45. Location of the serine residue involved in the linkage between the terminal protein and the DNA of phage phi 29.
    Nucleic Acids Res. 1985 Nov 11;13(21):7715-28 PMID: 3934646
  46. A modular system for the assay of transcription regulatory signals: the sequence TAATGARAT is required for herpes simplex virus immediate early gene activation.
    Nucleic Acids Res. 1985 Nov 11;13(21):7847-63 PMID: 2999706
  47. Direct combinatorial interaction between a herpes simplex virus regulatory protein and a cellular octamer-binding factor mediates specific induction of virus immediate-early gene expression.
    EMBO J. 1988 Dec 20;7(13):4231-8 PMID: 2854058
  48. Mutational analysis of the herpes simplex virus trans-inducing factor Vmw65.
    Gene. 1989 Feb 20;75(2):213-24 PMID: 2541050
  49. Overlapping octamer and TAATGARAT motifs in the VF65-response elements in herpes simplex virus immediate-early promoters represent independent binding sites for cellular nuclear factor III.
    J Virol. 1989 Jun;63(6):2798-812 PMID: 2542590
  50. The C-terminal 79 amino acids of the herpes simplex virus regulatory protein, Vmw65, efficiently activate transcription in yeast and mammalian cells in chimeric DNA-binding proteins.
    EMBO J. 1989 Aug;8(8):2337-42 PMID: 2676518
  51. A nuclear factor that binds to a conserved sequence motif in transcriptional control elements of immunoglobulin genes.
    Nature. 1986 Jan 9-15;319(6049):154-8 PMID: 3079885
Article Info
Journal
Journal of virology
Abbr.
J Virol
ISSN
0022-538X
Published
1990-06-00
Pages
2716-24
Language
English
Region
United States
NLM ID
0113724
PMCID
PMC249451
Subset
IM
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