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PMID: 2904678 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, P.H.S.

Isolation and characterization of a Xenopus laevis C protein cDNA: structure and expression of a heterogeneous nuclear ribonucleoprotein core protein.

Preugschat F, Wold B

Abstract

The C proteins are major components of heterogeneous nuclear ribonucleoprotein complexes in nuclei of vertebrate cells. To begin to describe their structure, expression, and function we isolated and determined the DNA sequence of Xenopus laevis C protein cDNA clones. The protein predicted from the DNA sequence has a molecular mass of 30,916 kDa and is very similar to its human counterpart. Although mammalian genomes contain many copies of C protein sequence, the Xenopus genome contains few copies. When C protein RNA was synthesized in vitro and microinjected into stage-VI Xenopus oocytes, newly synthesized C proteins were efficiently localized in the nucleus. In vitro rabbit reticulocyte lysate and in vivo Xenopus oocyte translation systems both produce from a single mRNA two discrete polypeptide species that accumulate in a ratio similar to that of mammalian C1 and C2 proteins in vivo.

MeSH Terms
Animals Base Sequence Carrier Proteins/genetics DNA/analysis,isolation & purification Heterogeneous-Nuclear Ribonucleoprotein Group C Heterogeneous-Nuclear Ribonucleoproteins Molecular Sequence Data Molecular Weight RNA, Messenger/analysis Rabbits Ribonucleoproteins/genetics,metabolism Xenopus laevis
Chemicals
C1 HNRNP Carrier Proteins HNRNPC protein, human Heterogeneous-Nuclear Ribonucleoprotein Group C Heterogeneous-Nuclear Ribonucleoproteins RNA, Messenger Ribonucleoproteins citrate-binding transport protein DNA
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Preugschat F
Division of Biology, California Institute of Technology, Pasadena 91125.
Wold B
References (61)
61 references, click to expand
  1. Biochemical complementation with RNA in the Xenopus oocyte: a small RNA is required for the generation of 3' histone mRNA termini.
    Cell. 1983 Oct;34(3):823-8 PMID: 6194891
  2. cDNA cloning of human hnRNP protein A1 reveals the existence of multiple mRNA isoforms.
    Nucleic Acids Res. 1988 May 11;16(9):3751-70 PMID: 2836799
  3. Formation of the 3' end of histone mRNA by post-transcriptional processing.
    Nature. 1984 Mar 8-14;308(5955):203-6 PMID: 6700722
  4. Phosphorylation of the C-proteins of HeLa cell hnRNP particles. Involvement of a casein kinase II-type enzyme.
    J Biol Chem. 1984 Jan 10;259(1):31-40 PMID: 6423627
  5. Characterization of heterogeneous nuclear RNA-protein complexes in vivo with monoclonal antibodies.
    Mol Cell Biol. 1984 Jun;4(6):1104-14 PMID: 6204191
  6. Efficient in vitro synthesis of biologically active RNA and RNA hybridization probes from plasmids containing a bacteriophage SP6 promoter.
    Nucleic Acids Res. 1984 Sep 25;12(18):7035-56 PMID: 6091052
  7. Processing and nucleo-cytoplasmic transport of histone gene transcripts.
    Nucleic Acids Res. 1984 Nov 26;12(22):8539-51 PMID: 6095202
  8. Isolation of the heterogeneous nuclear RNA-ribonucleoprotein complex (hnRNP): a unique supramolecular assembly.
    Proc Natl Acad Sci U S A. 1984 Dec;81(23):7471-5 PMID: 6594697
  9. The core proteins of 35S hnRNP complexes. Characterization of nine different species.
    Eur J Biochem. 1985 Jan 2;146(1):71-81 PMID: 3881256
  10. Co-existence of two different types of soluble histone complexes in nuclei of Xenopus laevis oocytes.
    J Biol Chem. 1985 Jan 25;260(2):1166-76 PMID: 2981836
  11. General organization of protein in HeLa 40S nuclear ribonucleoprotein particles.
    J Cell Biol. 1985 May;100(5):1570-81 PMID: 3988802
  12. A sequence downstream of A-A-U-A-A-A is required for formation of simian virus 40 late mRNA 3' termini in frog oocytes.
    Proc Natl Acad Sci U S A. 1985 Jun;82(12):3949-53 PMID: 2987956
  13. Transcription, processing and nuclear transport of a B1 Alu RNA species complementary to an intron of the murine alpha-fetoprotein gene.
    Nature. 1985 Sep 5-11;317(6032):81-4 PMID: 2412135
  14. Identification and cloning of localized maternal RNAs from Xenopus eggs.
    Cell. 1985 Oct;42(3):769-77 PMID: 2414011
  15. The nuclear location signal.
    Proc R Soc Lond B Biol Sci. 1985 Oct 22;226(1242):43-58 PMID: 2866523
  16. High pressure liquid chromatography purification of UP1 and UP2, two related single-stranded nucleic acid-binding proteins from calf thymus.
    J Biol Chem. 1986 Jan 15;261(2):878-83 PMID: 3941105
  17. Structure of rodent helix-destabilizing protein revealed by cDNA cloning.
    J Biol Chem. 1986 Mar 15;261(8):3536-43 PMID: 3005291
  18. Heterogeneous nuclear ribonucleoproteins: role in RNA splicing.
    Science. 1986 Mar 28;231(4745):1534-9 PMID: 3952495
  19. Molecular cloning of cDNA for the nuclear ribonucleoprotein particle C proteins: a conserved gene family.
    Proc Natl Acad Sci U S A. 1986 Apr;83(7):2007-11 PMID: 3457372
  20. Dideoxy sequencing method using denatured plasmid templates.
    Anal Biochem. 1986 Feb 1;152(2):232-8 PMID: 3516005
  21. A single gene from yeast for both nuclear and cytoplasmic polyadenylate-binding proteins: domain structure and expression.
    Cell. 1986 Jun 20;45(6):827-35 PMID: 3518950
  22. A cDNA clone of the hnRNP C proteins and its homology with the single-stranded DNA binding protein UP2.
    Nucleic Acids Res. 1986 May 27;14(10):4077-94 PMID: 3754960
  23. 3' end formation of U1 snRNA precursors is coupled to transcription from snRNA promoters.
    Cell. 1986 Oct 24;47(2):259-66 PMID: 3021336
  24. mRNA polyadenylate-binding protein: gene isolation and sequencing and identification of a ribonucleoprotein consensus sequence.
    Mol Cell Biol. 1986 Aug;6(8):2932-43 PMID: 3537727
  25. Cloning of the human cDNA for the U1 RNA-associated 70K protein.
    EMBO J. 1986 Dec 1;5(12):3209-17 PMID: 3028775
  26. Structure and function of nuclear and cytoplasmic ribonucleoprotein particles.
    Annu Rev Cell Biol. 1986;2:459-98 PMID: 3548774
  27. Nucleolin, the major nucleolar protein of growing eukaryotic cells: an unusual protein structure revealed by the nucleotide sequence.
    Proc Natl Acad Sci U S A. 1987 Mar;84(6):1472-6 PMID: 3470736
  28. pen repeat sequences are GGN clusters and encode a glycine-rich domain in a Drosophila cDNA homologous to the rat helix destabilizing protein.
    Proc Natl Acad Sci U S A. 1987 Apr;84(7):1819-23 PMID: 3031652
  29. Analysis of a cDNA clone expressing a human autoimmune antigen: full-length sequence of the U2 small nuclear RNA-associated B" antigen.
    Proc Natl Acad Sci U S A. 1987 Apr;84(8):2421-5 PMID: 2951739
  30. Nucleoplasmin cDNA sequence reveals polyglutamic acid tracts and a cluster of sequences homologous to putative nuclear localization signals.
    EMBO J. 1987 Jan;6(1):69-74 PMID: 2884102
  31. Primary structure of human nuclear ribonucleoprotein particle C proteins: conservation of sequence and domain structures in heterogeneous nuclear RNA, mRNA, and pre-rRNA-binding proteins.
    Mol Cell Biol. 1987 May;7(5):1731-9 PMID: 3110598
  32. Human mRNA polyadenylate binding protein: evolutionary conservation of a nucleic acid binding motif.
    Nucleic Acids Res. 1987 Jun 25;15(12):4771-87 PMID: 2885805
  33. Saccharomyces cerevisiae SSB1 protein and its relationship to nucleolar RNA-binding proteins.
    Mol Cell Biol. 1987 Aug;7(8):2947-55 PMID: 2823109
  34. A single domain of yeast poly(A)-binding protein is necessary and sufficient for RNA binding and cell viability.
    Mol Cell Biol. 1987 Sep;7(9):3268-76 PMID: 3313012
  35. cDNA cloning of the human U1 snRNA-associated A protein: extensive homology between U1 and U2 snRNP-specific proteins.
    EMBO J. 1987 Dec 1;6(12):3841-8 PMID: 2962859
  36. Set of novel, conserved proteins fold pre-messenger RNA into ribonucleosomes.
    Proteins. 1986 Nov;1(3):195-210 PMID: 3329728
  37. Reversible dissociation of nuclear ribonucleoprotein particle containing mRNA into RNA and protein.
    J Mol Biol. 1967 Jul 14;27(1):187-91 PMID: 6033610
  38. Proteins associated with heterogeneous nuclear RNA in eukaryotic cells.
    J Mol Biol. 1974 Feb 25;83(2):163-83 PMID: 4821869
  39. Ultrastructural patterns of RNA synthesis during early embryogenesis of Drosophila melanogaster.
    Cell. 1976 Jun;8(2):305-19 PMID: 822943
  40. Comparative organization of active transcription units in Oncopeltus fasciatus.
    Cell. 1976 Sep;9(1):131-46 PMID: 975237
  41. Identification and characterization of the packaging proteins of core 40S hnRNP particles.
    Cell. 1977 May;11(1):127-38 PMID: 872217
  42. The structure of nuclear ribonucleoprotein of amphibian oocytes.
    J Cell Sci. 1977 Apr;24:143-65 PMID: 561088
  43. RNA molecular weight determinations by gel electrophoresis under denaturing conditions, a critical reexamination.
    Biochemistry. 1977 Oct 18;16(21):4743-51 PMID: 911786
  44. Substructure of nuclear ribonucleoprotein complexes.
    Cold Spring Harb Symp Quant Biol. 1978;42 Pt 2:899-909 PMID: 277324
  45. Isolation of biologically active ribonucleic acid from sources enriched in ribonuclease.
    Biochemistry. 1979 Nov 27;18(24):5294-9 PMID: 518835
  46. Sequencing end-labeled DNA with base-specific chemical cleavages.
    Methods Enzymol. 1980;65(1):499-560 PMID: 6246368
  47. Assembly of nucleosomes: the reaction involving X. laevis nucleoplasmin.
    Cell. 1980 Sep;21(2):373-83 PMID: 7407918
  48. Intranuclear location of the tRNA splicing enzymes.
    Cell. 1981 Jan;23(1):89-93 PMID: 7214528
  49. The sequence 5'-AAUAAA-3'forms parts of the recognition site for polyadenylation of late SV40 mRNAs.
    Cell. 1981 Apr;24(1):251-60 PMID: 6113054
  50. Nuclear ribonucleoprotein particles probed in living cells.
    Proc Natl Acad Sci U S A. 1981 Apr;78(4):2208-12 PMID: 6941279
  51. Proteins associated with poly(A) and other regions of mRNA and hnRNA molecules as investigated by crosslinking.
    Cell. 1981 Jun;24(3):775-83 PMID: 7249081
  52. Specificity in the interaction of hnRNA and mRNA with proteins as revealed by in vivo cross linking.
    FEBS Lett. 1981 Aug 3;130(2):223-6 PMID: 6116619
  53. Adenoviral heterogeneous nuclear RNA is associated with host cell proteins.
    Eur J Biochem. 1981 Oct;119(3):461-7 PMID: 7308194
  54. Correlation of hnRNP structure and nascent transcript cleavage.
    Cell. 1981 Oct;26(2 Pt 2):155-65 PMID: 6174239
  55. A simple method for displaying the hydropathic character of a protein.
    J Mol Biol. 1982 May 5;157(1):105-32 PMID: 7108955
  56. Impaired nuclear transport of a human variant tRNAiMet.
    Nature. 1982 Nov 4;300(5887):81-4 PMID: 6923137
  57. Casein kinases--multipotential protein kinases.
    Curr Top Cell Regul. 1982;21:101-27 PMID: 6814825
  58. Human beta-globin pre-mRNA synthesized in vitro is accurately spliced in Xenopus oocyte nuclei.
    Cell. 1983 Mar;32(3):681-94 PMID: 6550524
  59. Comparison of initiation of protein synthesis in procaryotes, eucaryotes, and organelles.
    Microbiol Rev. 1983 Mar;47(1):1-45 PMID: 6343825
  60. New M13 vectors for cloning.
    Methods Enzymol. 1983;101:20-78 PMID: 6310323
  61. tRNA transport from the nucleus in a eukaryotic cell: carrier-mediated translocation process.
    Proc Natl Acad Sci U S A. 1983 Nov;80(21):6436-40 PMID: 6579529
Article Info
Journal
Proceedings of the National Academy of Sciences of the United States of America
Abbr.
Proc Natl Acad Sci U S A
ISSN
0027-8424
Published
1988-12-00
Pages
9669-73
Language
English
Region
United States
NLM ID
7505876
PMCID
PMC282832
Subset
IM
Databases
GENBANK
J03831
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