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PMID: 3523437 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

The involvement of host replication proteins and of specific origin sequences in the in vitro replication of miniplasmid R1 DNA.

Nucleic acids research ·Vol. 14 ·No. 12 ·1986-06-25 ·Pages 4865-79

Ortega S, Lanka E, Diaz R

Abstract

The in vitro replication of R1 miniplasmid promoted by purified preparations of the plasmid encoded RepA protein in cell extracts of E. coli is resistant to rifampicin and can be completely inhibited by antibodies against DnaG, the primase of the cell, as well as by antibodies against proteins DnaB and SSB. R1 replication is abolished in extracts deficient in the DnaA protein. This deficiency is efficiently complemented by purified preparations of the DnaA protein. The in vitro replication of plasmid R1 is also abolished in DnaC deficient extracts and by a 10 bp deletion (nucleotides 1463-1472) within the minimal origin region. These data indicate the requirement of the DnaA, DnaB, DnaC, DnaG and SSB replication proteins of the host, as well as of specific oriR1 sequences for the RepA dependent replication of plasmid R1. The implications of these results for the initiation of R1 replication are discussed.

MeSH Terms
Bacterial Proteins/genetics Cell-Free System DNA Replication DNA, Bacterial/genetics DNA-Binding Proteins/genetics Escherichia coli/genetics In Vitro Techniques Plasmids
Chemicals
Bacterial Proteins DNA, Bacterial DNA-Binding Proteins
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Ortega S
Lanka E
Diaz R
References (45)
45 references, click to expand
  1. Initiation of plasmid R1 replication in vitro is independent of transcription by host RNA polymerase.
    Nucleic Acids Res. 1984 Jul 11;12(13):5175-91 PMID: 6087275
  2. Vertical dye-buoyant density gradients for rapid analysis and preparation of plasmid DNA.
    Anal Biochem. 1981 Nov 15;118(1):191-3 PMID: 7337211
  3. Supercoiled circular DNA-protein complex in Escherichia coli: purification and induced conversion to an opern circular DNA form.
    Proc Natl Acad Sci U S A. 1969 Apr;62(4):1159-66 PMID: 4894690
  4. Mechanism of dnaB protein action. V. Association of dnaB protein, protein n', and other repriming proteins in the primosome of DNA replication.
    J Biol Chem. 1981 May 25;256(10):5273-80 PMID: 6262328
  5. Cleavage of structural proteins during the assembly of the head of bacteriophage T4.
    Nature. 1970 Aug 15;227(5259):680-5 PMID: 5432063
  6. Isolation and characterization of thermosensitive Escherichia coli mutants defective in deoxyribonucleic acid replication.
    J Bacteriol. 1973 Mar;113(3):1381-8 PMID: 4570784
  7. Sequence differences of Escherichia coli 30S ribosomal proteins as determined by immunochemical methods.
    Proc Natl Acad Sci U S A. 1971 Sep;68(9):2283-7 PMID: 5002431
  8. Discriminatory function of ribonuclease H in the selective initiation of plasmid DNA replication.
    Nucleic Acids Res. 1982 Feb 11;10(3):833-53 PMID: 6278438
  9. Site specific recombination involved in the generation of small plasmids.
    Mol Gen Genet. 1978 Feb 16;159(2):131-41 PMID: 345087
  10. The nucleotide sequence of a DNA fragment from the replication origin of the antibiotic resistance factor R1drd19.
    Mol Gen Genet. 1979 Mar 27;171(3):277-85 PMID: 377014
  11. The effects of an Escherichia coli dnaAts mutation on the replication of the plasmids colE1 pSC101, R100.1 and RTF-TC.
    Mol Gen Genet. 1979 Jul 13;174(2):117-26 PMID: 386040
  12. Replication of a bacterial plasmid and an episome in Escherichia coli.
    Biochemistry. 1970 Jan 20;9(2):399-406 PMID: 4904868
  13. Segregation of New Lysogenic Types during Growth of a Doubly Lysogenic Strain Derived from Escherichia Coli K12.
    Genetics. 1954 Jul;39(4):440-52 PMID: 17247495
  14. Origin and direction of mini-R1 plasmid DNA replication in cell extracts of Escherichia coli.
    J Bacteriol. 1982 Jun;150(3):1077-84 PMID: 6281234
  15. Different base/base mismatches are corrected with different efficiencies by the methyl-directed DNA mismatch-repair system of E. coli.
    Cell. 1984 Oct;38(3):879-87 PMID: 6386179
  16. Rifampicin-resistant initiation of DNA synthesis on the isolated strands of ColE plasmid DNA.
    Nucleic Acids Res. 1981 Oct 24;9(20):5215-31 PMID: 6272215
  17. The nucleotide sequence of the replication control region of the resistance plasmid R1drd-19.
    Mol Gen Genet. 1981;181(1):116-22 PMID: 6261081
  18. Nonchromosomal antibiotic resistance in bacteria: genetic transformation of Escherichia coli by R-factor DNA.
    Proc Natl Acad Sci U S A. 1972 Aug;69(8):2110-4 PMID: 4559594
  19. Characterization of an improved in vitro DNA replication system for Escherichia coli plasmids.
    Nucleic Acids Res. 1979 Jul 25;6(10):3289-304 PMID: 384367
  20. A new pair of M13 vectors for selecting either DNA strand of double-digest restriction fragments.
    Gene. 1982 Oct;19(3):269-76 PMID: 6295880
  21. Definition of oriR, the minimum DNA segment essential for initiation of R1 plasmid replication in vitro.
    Proc Natl Acad Sci U S A. 1983 Nov;80(22):6814-8 PMID: 6316326
  22. Control of plasmid R1 replication: functions involved in replication, copy number control, incompatibility, and switch-off of replication.
    J Bacteriol. 1980 Jan;141(1):111-20 PMID: 6986353
  23. Insertion of an R1 plasmid into the origin of replication of the E. coli chromosome: random timing of replication of the hybrid chromosome.
    Cell. 1986 Jan 17;44(1):117-24 PMID: 3510077
  24. Analysis of plasmid genome evolution based on nucleotide-sequence comparison of two related plasmids of Escherichia coli.
    Gene. 1982 Mar;17(3):299-310 PMID: 6286411
  25. Maintenance of plasmid pSC101 in Escherichia coli requires the host primase.
    J Bacteriol. 1985 Oct;164(1):484-6 PMID: 3900047
  26. Total synthesis of a gene.
    Science. 1979 Feb 16;203(4381):614-25 PMID: 366749
  27. Screening lambdagt recombinant clones by hybridization to single plaques in situ.
    Science. 1977 Apr 8;196(4286):180-2 PMID: 322279
  28. Studies on the initiation of plasmid DNA replication.
    Eur J Biochem. 1974 Jan 3;41(1):51-62 PMID: 4593337
  29. Expression of a DNA strand initiation sequence of ColE1 plasmid in a single-stranded DNA phage.
    Proc Natl Acad Sci U S A. 1980 Nov;77(11):6566-70 PMID: 7005899
  30. The dnaA protein complex with the E. coli chromosomal replication origin (oriC) and other DNA sites.
    Cell. 1984 Oct;38(3):889-900 PMID: 6091903
  31. Structure and replication of the colicin E1 plasmid.
    Curr Top Microbiol Immunol. 1978;83:93-156 PMID: 365473
  32. Initiation of enzymatic replication at the origin of the Escherichia coli chromosome: contributions of RNA polymerase and primase.
    Proc Natl Acad Sci U S A. 1985 Jun;82(11):3562-6 PMID: 2987933
  33. Control of replication of bacterial plasmids: genetics, molecular biology, and physiology of the plasmid R1 system.
    Plasmid. 1984 Sep;12(2):71-90 PMID: 6209739
  34. Initiation of enzymatic replication at the origin of the Escherichia coli chromosome: primase as the sole priming enzyme.
    Proc Natl Acad Sci U S A. 1985 Jun;82(12):3954-8 PMID: 2408271
  35. Site-specific deletion at the replication origin of the antibiotic resistance factor R1.
    Mol Gen Genet. 1980 Feb;177(3):413-9 PMID: 6246397
  36. Plasmid replication functions. III. Origin and direction of replication of a "mini" plasmid derived from R6-5.
    Mol Gen Genet. 1979 Jan 5;168(1):27-36 PMID: 372738
  37. An Escherichia coli replication protein that recognizes a unique sequence within a hairpin region in phi X174 DNA.
    Proc Natl Acad Sci U S A. 1980 Feb;77(2):799-803 PMID: 6444725
  38. Replication of small plasmids in extracts of Escherichia coli: involvement of the dnaB and dnaC protein in the replication of early replicative intermediates.
    Mol Gen Genet. 1978 Jul 4;162(3):243-9 PMID: 355831
  39. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding.
    Anal Biochem. 1976 May 7;72:248-54 PMID: 942051
  40. Plasmid R1 DNA replication dependent on protein synthesis in cell-free extracts of E. coli.
    Nature. 1981 Jan 22;289(5795):326-8 PMID: 7005697
  41. A 37 X 10(3) molecular weight plasmid-encoded protein is required for replication and copy number control in the plasmid pSC101 and its temperature-sensitive derivative pHS1.
    J Mol Biol. 1984 May 25;175(3):331-48 PMID: 6327996
  42. Identification and mapping of the replication genes of an R factor, R100-1, integrated into the chromosome of Escherichia coli K-12.
    J Bacteriol. 1974 Jun;118(3):1123-31 PMID: 4597997
  43. Suppression of an Escherichia coli dnaA mutation by the integrated R factor R100.1: origin of chromosome replication during exponential growth.
    J Bacteriol. 1977 Aug;131(2):421-30 PMID: 328481
  44. Replication of the colicin E1 plasmid in extracts of Escherichia coli: uncoupling of leading strand from lagging strand synthesis.
    Mol Gen Genet. 1979;177(1):113-20 PMID: 231724
  45. Origin and direction of replication of the drug resistance plasmid R100.1 and of a resistance transfer factor derivative in synchronized cultures.
    J Bacteriol. 1977 Sep;131(3):929-42 PMID: 330504
Article Info
Journal
Nucleic acids research
Abbr.
Nucleic Acids Res
ISSN
0305-1048
Published
1986-06-25
Pages
4865-79
Language
English
Region
England
NLM ID
0411011
PMCID
PMC311497
Subset
IM
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