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PMID: 6812046 Published · ppublish English Journal Article Research Support, U.S. Gov't, P.H.S.

Immunological method for mapping genes on Drosophila polytene chromosomes.

Langer-Safer PR, Levine M, Ward DC

Abstract

A method is described for localizing DNA sequences hybridized in situ to Drosophila polytene chromosomes. This procedure utilizes a biotin-labeled analog of TTP that can be incorporated enzymatically into DNA probes by nick-translation. After hybridization in situ, the biotin molecules in the probe serve as antigens which bind affinity-purified rabbit antibiotin antibodies. The site of hybridization is then detected either fluorimetrically, by using fluorescein-labeled goat anti-rabbit IgG, or cytochemically, by using an anti-rabbit IgG antibody conjugated to horseradish peroxidase. When combined with Giemsa staining, the immunoperoxidase detection method provides a permanent record that is suitable for detailed cytogenetic analysis. This immunological approach offers four advantages over conventional autoradiographic procedures for detecting in situ hybrids: (i) the time required to determine the site of hybridization is decreased markedly, (ii) biotin-labeled probes are chemically stable and give reproducible results for many months; (iii) biotin-labeled probes appear to produce less background noise than do radiolabeled probes; and (iv) the resolving power is equal to and often greater than that achieved autoradiographically.

MeSH Terms
Animals Biotin/immunology Chromosome Mapping Chromosomes/ultrastructure Drosophila melanogaster/genetics Immunoenzyme Techniques Methods Nucleic Acid Hybridization
Chemicals
Biotin
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Langer-Safer P R
Levine M
Ward D C
References (34)
34 references, click to expand
  1. A membrane-filter technique for the detection of complementary DNA.
    Biochem Biophys Res Commun. 1966 Jun 13;23(5):641-6 PMID: 5963888
  2. Chemical coupling of proteins to agarose.
    Nature. 1967 Sep 30;215(5109):1491-2 PMID: 6059570
  3. RNA-DNA hybrids at the cytological level.
    Nature. 1969 Aug 9;223(5206):582-7 PMID: 5799530
  4. Formation and detection of RNA-DNA hybrid molecules in cytological preparations.
    Proc Natl Acad Sci U S A. 1969 Jun;63(2):378-83 PMID: 4895535
  5. Use of the avidin-biotin complex for specific staining of biological membranes in electron microscopy.
    Proc Natl Acad Sci U S A. 1974 Sep;71(9):3537-41 PMID: 4139715
  6. Localisation of 5S ribosomal RNA genes on human chromosome 1.
    Nature. 1974 Dec 20;252(5485):741-3 PMID: 4437633
  7. Avidin.
    Adv Protein Chem. 1975;29:85-133 PMID: 237414
  8. Nucleic acid hybridization to the DNA of cytological preparations.
    Methods Cell Biol. 1975;10:1-16 PMID: 1102840
  9. A new method of in situ hybridization.
    Chromosoma. 1975 Nov 24;53(2):107-17 PMID: 172297
  10. High resolution detection of DNA-RNA hybrids in situ by indirect immunofluorescence.
    Nature. 1977 Feb 3;265(5593):472-3 PMID: 401954
  11. Labeling deoxyribonucleic acid to high specific activity in vitro by nick translation with DNA polymerase I.
    J Mol Biol. 1977 Jun 15;113(1):237-51 PMID: 881736
  12. Avidin binds to condensed chromatin.
    Stain Technol. 1977 May;52(3):165-9 PMID: 70089
  13. A new specific, sensitive and non-carcinogenic reagent for the demonstration of horseradish peroxidase.
    Histochem J. 1977 Nov;9(6):789-92 PMID: 72746
  14. Quantitative in situ hybridization of ribosomal RNA species to polytene chromosomes of Drosophila melanogaster.
    J Mol Biol. 1977 Sep 25;115(3):539-63 PMID: 412977
  15. Gene mapping by fluorescent in situ hybridization.
    Cell Biol Int Rep. 1977 May;1(3):255-62 PMID: 564744
  16. Electron microscopic visualization of tRNA genes with ferritin-avidin: biotin labels.
    Nucleic Acids Res. 1978 Feb;5(2):363-84 PMID: 345243
  17. Gene mapping and gene enrichment by the avidin-biotin interaction: use of cytochrome-c as a polyamine bridge.
    Nucleic Acids Res. 1978 Feb;5(2):385-401 PMID: 204910
  18. Acetylation of chromosome squashes of Drosophila melanogaster decreases the background in autoradiographs from hybridization with [125I]-labeled RNA.
    J Histochem Cytochem. 1978 Aug;26(8):677-9 PMID: 99471
  19. The isolation of structural genes from libraries of eucaryotic DNA.
    Cell. 1978 Oct;15(2):687-701 PMID: 719759
  20. Detection of viral sequences of low reiteration frequency by in situ hybridization.
    Proc Natl Acad Sci U S A. 1978 Dec;75(12):6125-9 PMID: 216014
  21. Antibodies that bind biotin and inhibit biotin-containing enzymes.
    Methods Enzymol. 1979;62:319-26 PMID: 571508
  22. Chromosome 1 contains the endogenous RAV-0 retrovirus sequences in chicken cells.
    Proc Natl Acad Sci U S A. 1979 Dec;76(12):6486-90 PMID: 230512
  23. Detection of specific RNAs or specific fragments of DNA by fractionation in gels and transfer to diazobenzyloxymethyl paper.
    Methods Enzymol. 1979;68:220-42 PMID: 94421
  24. The use of the avidin-biotin complex as a tool in molecular biology.
    Methods Biochem Anal. 1980;26:1-45 PMID: 7392958
  25. A new method for fluorescence microscopical localization of specific DNA sequences by in situ hybridization of fluorochromelabelled RNA.
    Exp Cell Res. 1980 Aug;128(2):485-90 PMID: 6157553
  26. Transfer RNA genes of Drosophila melanogaster.
    Nucleic Acids Res. 1980 Jul 11;8(13):2921-37 PMID: 6776487
  27. Iminobiotin affinity columns and their application to retrieval of streptavidin.
    Proc Natl Acad Sci U S A. 1980 Aug;77(8):4666-8 PMID: 6933515
  28. Cytochemical hybridization with fluorochrome-labeled RNA. II. Applications.
    J Histochem Cytochem. 1981 Feb;29(2):238-46 PMID: 6166654
  29. Localization of a unique gene by direct hybridization in situ.
    Proc Natl Acad Sci U S A. 1981 Jun;78(6):3755-9 PMID: 6943581
  30. Localization of single copy DNA sequences of G-banded human chromosomes by in situ hybridization.
    Chromosoma. 1981;83(3):431-9 PMID: 7273954
  31. Rapid and high resolution detection of in situ hybridisation to polytene chromosomes using fluorochrome-labeled RNA.
    Chromosoma. 1981;84(1):1-18 PMID: 6170491
  32. The initiator tRNA genes of Drosophila melanogaster: evidence for a tRNA pseudogene.
    Nucleic Acids Res. 1981 Nov 25;9(22):5867-82 PMID: 6273811
  33. Enzymatic synthesis of biotin-labeled polynucleotides: novel nucleic acid affinity probes.
    Proc Natl Acad Sci U S A. 1981 Nov;78(11):6633-7 PMID: 6273878
  34. Transmission electron microscopic method for gene mapping on polytene chromosomes by in situ hybridization.
    Proc Natl Acad Sci U S A. 1981 Nov;78(11):7059-63 PMID: 6947272
Article Info
Journal
Proceedings of the National Academy of Sciences of the United States of America
Abbr.
Proc Natl Acad Sci U S A
ISSN
0027-8424
Published
1982-07-00
Pages
4381-5
Language
English
Region
United States
NLM ID
7505876
PMCID
PMC346675
Subset
IM
Grants
NCI NIH HHS · CA-16038 · United States
NIGMS NIH HHS · GM-20124 · United States
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