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PMID: 7537871 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Splicing of a circular yeast pre-mRNA in vitro.

Nucleic acids research ·Vol. 23 ·No. 7 ·1995-04-11 ·Pages 1133-9

Schindewolf CA, Domdey H

Abstract

We have tested the fate of a circularized synthetic pre-mRNA transcript in a whole cell splicing extract of Saccharomyces cerevisiae. Our results demonstrate that this circular precursor RNA is able to induce spliceosome formation in vitro and that the products of the following splicing reaction are the lariat-shaped intron, and a mature circular mRNA. Thus, it would appear that free 5' and/or 3' ends are not obligatory for a splicing reaction to occur, although we find its efficiency to be strongly influenced by the presence or lack of free ends. To our knowledge, this is the first demonstration that a circular pre-mRNA molecule is recognized as a suitable substrate by an eukaryotic mRNA splicing apparatus.

Related Genes
MeSH Terms
Base Sequence DNA, Fungal/genetics Electrophoresis, Gel, Two-Dimensional Genes, Fungal Molecular Sequence Data RNA/genetics,isolation & purification,metabolism RNA Precursors/genetics,isolation & purification,metabolism RNA Processing, Post-Transcriptional RNA Splicing RNA, Circular RNA, Fungal/genetics,isolation & purification,metabolism Saccharomyces cerevisiae/genetics,metabolism Spliceosomes/metabolism Transcription, Genetic
Chemicals
DNA, Fungal RNA Precursors RNA, Circular RNA, Fungal RNA
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Schindewolf C A
Institut für Biochemie, Genzentrum, Ludwig-Maximilians-Universität München, Germany.
Domdey H
References (39)
39 references, click to expand
  1. Synthesis of circular RNA in bacteria and yeast using RNA cyclase ribozymes derived from a group I intron of phage T4.
    Proc Natl Acad Sci U S A. 1994 Apr 12;91(8):3117-21 PMID: 7512723
  2. The splicing factor PRP2, a putative RNA helicase, interacts directly with pre-mRNA.
    EMBO J. 1994 Feb 15;13(4):888-97 PMID: 8112302
  3. RNA splicing. U2 fulfils a commitment.
    Curr Biol. 1994 Mar 1;4(3):264-7 PMID: 7922333
  4. Randomization-selection analysis of snRNAs in vivo: evidence for a tertiary interaction in the spliceosome.
    Genes Dev. 1994 May 1;8(9):1071-86 PMID: 7926788
  5. Isolation and sequence of the gene for actin in Saccharomyces cerevisiae.
    Proc Natl Acad Sci U S A. 1980 Jul;77(7):3912-6 PMID: 7001447
  6. Evidence for an intron-contained sequence required for the splicing of yeast RNA polymerase II transcripts.
    Cell. 1983 Jun;33(2):519-27 PMID: 6305513
  7. Point mutations identify the conserved, intron-contained TACTAAC box as an essential splicing signal sequence in yeast.
    Cell. 1984 Mar;36(3):645-53 PMID: 6365330
  8. Messenger RNA splicing in vitro: an excised intervening sequence and a potential intermediate.
    Cell. 1984 Jun;37(2):415-27 PMID: 6722880
  9. Excision of an intact intron as a novel lariat structure during pre-mRNA splicing in vitro.
    Cell. 1984 Aug;38(1):317-31 PMID: 6088074
  10. Efficient in vitro synthesis of biologically active RNA and RNA hybridization probes from plasmids containing a bacteriophage SP6 promoter.
    Nucleic Acids Res. 1984 Sep 25;12(18):7035-56 PMID: 6091052
  11. Recognition of cap structure in splicing in vitro of mRNA precursors.
    Cell. 1984 Oct;38(3):731-6 PMID: 6567484
  12. Lariat structures are in vivo intermediates in yeast pre-mRNA splicing.
    Cell. 1984 Dec;39(3 Pt 2):611-21 PMID: 6096014
  13. Rapid and efficient site-specific mutagenesis without phenotypic selection.
    Proc Natl Acad Sci U S A. 1985 Jan;82(2):488-92 PMID: 3881765
  14. A point mutation in the conserved hexanucleotide at a yeast 5' splice junction uncouples recognition, cleavage, and ligation.
    Cell. 1985 May;41(1):107-18 PMID: 2986840
  15. mRNA splicing efficiency in yeast and the contribution of nonconserved sequences.
    Cell. 1985 May;41(1):119-26 PMID: 3888403
  16. The "spliceosome": yeast pre-messenger RNA associates with a 40S complex in a splicing-dependent reaction.
    Science. 1985 May 24;228(4702):963-7 PMID: 3890181
  17. Size and position of intervening sequences are critical for the splicing efficiency of pre-mRNA in the yeast Saccharomyces cerevisiae.
    Nucleic Acids Res. 1985 Jun 11;13(11):3791-804 PMID: 3892483
  18. Yeast mRNA splicing in vitro.
    J Biol Chem. 1985 Nov 25;260(27):14780-92 PMID: 2997224
  19. Cap-dependent RNA splicing in a HeLa nuclear extract.
    Proc Natl Acad Sci U S A. 1985 Nov;82(22):7590-4 PMID: 3865180
  20. Identification of a yeast snRNP protein and detection of snRNP-snRNP interactions.
    Cell. 1987 Dec 24;51(6):1019-26 PMID: 2961458
  21. Yeast pre-mRNA splicing requires a minimum distance between the 5' splice site and the internal branch acceptor site.
    Mol Cell Biol. 1987 Nov;7(11):4010-6 PMID: 3323885
  22. Oligonucleotide-directed construction of mutations: a gapped duplex DNA procedure without enzymatic reactions in vitro.
    Nucleic Acids Res. 1988 Jul 25;16(14B):6987-99 PMID: 3405755
  23. Molecular consequences of truncations of the first exon for in vitro splicing of yeast actin pre-mRNA.
    Nucleic Acids Res. 1988 Aug 11;16(15):7233-9 PMID: 3045753
  24. Splicing and spliceosome formation of the yeast MATa1 transcript require a minimum distance from the 5' splice site to the internal branch acceptor site.
    Nucleic Acids Res. 1988 Oct 25;16(20):9457-75 PMID: 3054807
  25. A yeast tRNA precursor containing a pre-mRNA intron is spliced via the pre-mRNA splicing mechanism.
    EMBO J. 1990 Mar;9(3):705-9 PMID: 2178925
  26. Scrambled exons.
    Cell. 1991 Feb 8;64(3):607-13 PMID: 1991322
  27. Messenger RNA splicing in yeast: clues to why the spliceosome is a ribonucleoprotein.
    Science. 1991 Jul 12;253(5016):157-63 PMID: 1853200
  28. Splicing with inverted order of exons occurs proximal to large introns.
    EMBO J. 1992 Mar;11(3):1095-8 PMID: 1339341
  29. A novel base-pairing interaction between U2 and U6 snRNAs suggests a mechanism for the catalytic activation of the spliceosome.
    Cell. 1992 Nov 27;71(5):803-17 PMID: 1423631
  30. Evidence for a base-pairing interaction between U6 small nuclear RNA and 5' splice site during the splicing reaction in yeast.
    Proc Natl Acad Sci U S A. 1992 Dec 1;89(23):11269-73 PMID: 1333604
  31. Mis-splicing yields circular RNA molecules.
    FASEB J. 1993 Jan;7(1):155-60 PMID: 7678559
  32. Pre-mRNA splicing within an assembled yeast spliceosome requires an RNA-dependent ATPase and ATP hydrolysis.
    Proc Natl Acad Sci U S A. 1993 Feb 1;90(3):888-92 PMID: 8430102
  33. Circular transcripts of the testis-determining gene Sry in adult mouse testis.
    Cell. 1993 Jun 4;73(5):1019-30 PMID: 7684656
  34. The HRIGRXXR region of the DEAD box RNA helicase eukaryotic translation initiation factor 4A is required for RNA binding and ATP hydrolysis.
    Mol Cell Biol. 1993 Nov;13(11):6789-98 PMID: 8413273
  35. Mutations in U6 snRNA that alter splice site specificity: implications for the active site.
    Science. 1993 Dec 24;262(5142):1982-8 PMID: 8266093
  36. The U5 and U6 small nuclear RNAs as active site components of the spliceosome.
    Science. 1993 Dec 24;262(5142):1989-96 PMID: 8266094
  37. Involvement of U6 snRNA in 5' splice site selection.
    Science. 1993 Dec 24;262(5142):2035-9 PMID: 8266100
  38. A dominant negative mutation in the conserved RNA helicase motif 'SAT' causes splicing factor PRP2 to stall in spliceosomes.
    EMBO J. 1994 Feb 15;13(4):879-87 PMID: 8112301
  39. A nuclear cap binding protein complex involved in pre-mRNA splicing.
    Cell. 1994 Aug 26;78(4):657-68 PMID: 8069914
Article Info
Journal
Nucleic acids research
Abbr.
Nucleic Acids Res
ISSN
0305-1048
Published
1995-04-11
Pages
1133-9
Language
English
Region
England
NLM ID
0411011
PMCID
PMC306821
Subset
IM
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