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PMID: 8811092 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Mutational analysis of the human nucleotide excision repair gene ERCC1.

Nucleic acids research ·Vol. 24 ·No. 17 ·1996-09-01 ·Pages 3370-80

Sijbers AM, van der Spek PJ, Odijk H, van den Berg J, van Duin M, Westerveld A, Jaspers NG, Bootsma D, Hoeijmakers JH

Abstract

The human DNA repair protein ERCC1 resides in a complex together with the ERCC4, ERCC11 and XP-F correcting activities, thought to perform the 5' strand incision during nucleotide excision repair (NER). Its yeast counterpart, RAD1-RAD10, has an additional engagement in a mitotic recombination pathway, probably required for repair of DNA cross-links. Mutational analysis revealed that the poorly conserved N-terminal 91 amino acids of ERCC1 are dispensable for both repair functions, in contrast to a deletion of only four residues from the C-terminus. A database search revealed a strongly conserved motif in this C-terminus sharing sequence homology with many DNA break processing proteins, indicating that this part is primarily required for the presumed structure-specific endonuclease activity of ERCC1. Most missense mutations in the central region give rise to an unstable protein (complex). Accordingly, we found that free ERCC1 is very rapidly degraded, suggesting that protein-protein interactions provide stability. Survival experiments show that the removal of cross-links requires less ERCC1 than UV repair. This suggests that the ERCC1-dependent step in cross-link repair occurs outside the context of NER and provides an explanation for the phenotype of the human repair syndrome xeroderma pigmentosum group F.

MeSH Terms
Amino Acid Sequence Animals Cisplatin/pharmacology Conserved Sequence DNA Mutational Analysis DNA Repair/genetics DNA, Complementary/genetics DNA-Binding Proteins Dose-Response Relationship, Radiation Endonucleases/genetics Gene Amplification Genetic Complementation Test Humans Mitomycin/pharmacology Molecular Sequence Data Mutagenesis Mutagens/pharmacology Proteins/genetics Recombination, Genetic Rodentia/genetics Sequence Deletion Sequence Homology, Amino Acid Transfection Xeroderma Pigmentosum/etiology,genetics
Chemicals
DNA, Complementary DNA-Binding Proteins Mutagens Proteins Mitomycin ERCC1 protein, human Endonucleases Cisplatin
Authors & Affiliations
9 authors, click to expand affiliations / ORCID
Sijbers A M
Department of Cell Biology and Genetics, Erasmus University, Rotterdam, The Netherlands.
van der Spek P J
Odijk H
van den Berg J
van Duin M
Westerveld A
Jaspers N G
Bootsma D
Hoeijmakers J H
References (76)
76 references, click to expand
  1. Molecular characterization of the human excision repair gene ERCC-1: cDNA cloning and amino acid homology with the yeast DNA repair gene RAD10.
    Cell. 1986 Mar 28;44(6):913-23 PMID: 2420469
  2. Nucleotide sequence of the lig gene and primary structure of DNA ligase of Escherichia coli.
    Mol Gen Genet. 1986 Jul;204(1):1-7 PMID: 3018436
  3. Genomic characterization of the human DNA excision repair gene ERCC-1.
    Nucleic Acids Res. 1987 Nov 25;15(22):9195-213 PMID: 3684592
  4. Rapid and efficient site-specific mutagenesis without phenotypic selection.
    Methods Enzymol. 1987;154:367-82 PMID: 3323813
  5. Evolution and mutagenesis of the mammalian excision repair gene ERCC-1.
    Nucleic Acids Res. 1988 Jun 24;16(12):5305-22 PMID: 3290851
  6. Different types of recombination events are controlled by the RAD1 and RAD52 genes of Saccharomyces cerevisiae.
    Genetics. 1988 Oct;120(2):367-77 PMID: 3058548
  7. RAD1, an excision repair gene of Saccharomyces cerevisiae, is also involved in recombination.
    Mol Cell Biol. 1988 Sep;8(9):3619-26 PMID: 3065620
  8. Isolation, characterization, and expression in Escherichia coli of the DNA polymerase gene from Thermus aquaticus.
    J Biol Chem. 1989 Apr 15;264(11):6427-37 PMID: 2649500
  9. Summary of complementation groups of UV-sensitive CHO cell mutants isolated by large-scale screening.
    Mutagenesis. 1989 Sep;4(5):349-54 PMID: 2687628
  10. The XPA protein is a zinc metalloprotein with an ability to recognize various kinds of DNA damage.
    Mutat Res. 1994 Nov;315(3):229-37 PMID: 7526200
  11. DNA repair protein XPA binds replication protein A (RPA).
    J Biol Chem. 1995 Feb 24;270(8):4152-7 PMID: 7876167
  12. The general transcription-repair factor TFIIH is recruited to the excision repair complex by the XPA protein independent of the TFIIE transcription factor.
    J Biol Chem. 1995 Mar 3;270(9):4896-902 PMID: 7876263
  13. Chromosomal location of the Bacillus subtilis aspartokinase II gene and nucleotide sequence of the adjacent genes homologous to uvrC and trx of Escherichia coli.
    J Gen Microbiol. 1989 Nov;135(11):2931-40 PMID: 2559145
  14. RAD10, an excision repair gene of Saccharomyces cerevisiae, is involved in the RAD1 pathway of mitotic recombination.
    Mol Cell Biol. 1990 Jun;10(6):2485-91 PMID: 2188090
  15. Reconstitution of nucleotide excision nuclease with UvrA and UvrB proteins from Escherichia coli and UvrC protein from Bacillus subtilis.
    J Biol Chem. 1990 Dec 5;265(34):21337-41 PMID: 2174442
  16. Increased DNA synthesis and repair-enzyme expression in lymphocytes from patients with chronic lymphocytic leukemia resistant to nitrogen mustards.
    J Natl Cancer Inst. 1991 Apr 17;83(8):557-64 PMID: 2005641
  17. The C-terminal half of UvrC protein is sufficient to reconstitute (A)BC excinuclease.
    Proc Natl Acad Sci U S A. 1991 Aug 1;88(15):6824-8 PMID: 1862106
  18. DNA repair enzyme expression in chronic lymphocytic leukemia vis-à-vis nitrogen mustard drug resistance.
    Cancer Lett. 1995 Apr 14;90(2):139-48 PMID: 7736449
  19. Partial characterization of the DNA repair protein complex, containing the ERCC1, ERCC4, ERCC11 and XPF correcting activities.
    Mutat Res. 1995 Jul;337(1):25-39 PMID: 7596355
  20. Enhancement of damage-specific DNA binding of XPA by interaction with the ERCC1 DNA repair protein.
    Biochem Biophys Res Commun. 1995 Jun 26;211(3):960-6 PMID: 7598728
  21. Crystal structure of Thermus aquaticus DNA polymerase.
    Nature. 1995 Aug 17;376(6541):612-6 PMID: 7637814
  22. Human DNA repair excision nuclease. Analysis of the roles of the subunits involved in dual incisions by using anti-XPG and anti-ERCC1 antibodies.
    J Biol Chem. 1995 Sep 1;270(35):20862-9 PMID: 7657672
  23. Purification and characterization of the XPF-ERCC1 complex of human DNA repair excision nuclease.
    J Biol Chem. 1995 Sep 29;270(39):22657-60 PMID: 7559382
  24. The C-terminal region of the UvrB protein of Escherichia coli contains an important determinant for UvrC binding to the preincision complex but not the catalytic site for 3'-incision.
    J Biol Chem. 1995 Dec 22;270(51):30508-15 PMID: 8530482
  25. A new technique for the assay of infectivity of human adenovirus 5 DNA.
    Virology. 1973 Apr;52(2):456-67 PMID: 4705382
  26. High resolution two-dimensional electrophoresis of proteins.
    J Biol Chem. 1975 May 25;250(10):4007-21 PMID: 236308
  27. Transformation of mouse fibroblasts to methotrexate resistance by a recombinant plasmid expressing a prokaryotic dihydrofolate reductase.
    Proc Natl Acad Sci U S A. 1981 Mar;78(3):1527-31 PMID: 6262811
  28. Repair capability and the cellular age response for killing and mutation induction after UV.
    Mutat Res. 1982 Aug;95(2-3):505-14 PMID: 6889678
  29. High efficiency DNA-mediated transformation of primate cells.
    Science. 1983 Aug 5;221(4610):551-3 PMID: 6306768
  30. Complementation of DNA repair in xeroderma pigmentosum group A cell extracts by a protein with affinity for damaged DNA.
    EMBO J. 1991 Dec;10(12):3913-21 PMID: 1935910
  31. Induction of a mutant phenotype in human repair proficient cells after overexpression of a mutated human DNA repair gene.
    Nucleic Acids Res. 1991 Oct 25;19(20):5633-7 PMID: 1945841
  32. Localization of the nucleotide excision repair gene ERCC6 to human chromosome 10q11-q21.
    Genomics. 1992 Apr;12(4):745-9 PMID: 1349298
  33. Molecular cloning and DNA sequencing of the radC gene of Escherichia coli K-12.
    Mutat Res. 1992 May;273(3):263-9 PMID: 1374847
  34. Stable and specific association between the yeast recombination and DNA repair proteins RAD1 and RAD10 in vitro.
    Mol Cell Biol. 1992 Jul;12(7):3041-9 PMID: 1620114
  35. Active site of (A)BC excinuclease. I. Evidence for 5' incision by UvrC through a catalytic site involving Asp399, Asp438, Asp466, and His538 residues.
    J Biol Chem. 1992 Sep 5;267(25):17688-92 PMID: 1387639
  36. Specific complex formation between proteins encoded by the yeast DNA repair and recombination genes RAD1 and RAD10.
    Proc Natl Acad Sci U S A. 1992 Sep 1;89(17):8273-7 PMID: 1518857
  37. Identification of Bacillus subtilis genes for septum placement and shape determination.
    J Bacteriol. 1992 Nov;174(21):6717-28 PMID: 1400224
  38. Removal of nonhomologous DNA ends in double-strand break recombination: the role of the yeast ultraviolet repair gene RAD1.
    Science. 1992 Oct 16;258(5081):480-4 PMID: 1411547
  39. ERCC1 and ERCC2 expression in malignant tissues from ovarian cancer patients.
    J Natl Cancer Inst. 1992 Oct 7;84(19):1512-7 PMID: 1433335
  40. ERCC6, a member of a subfamily of putative helicases, is involved in Cockayne's syndrome and preferential repair of active genes.
    Cell. 1992 Dec 11;71(6):939-53 PMID: 1339317
  41. The protein sequence and some intron positions are conserved between the switching gene swi10 of Schizosaccharomyces pombe and the human excision repair gene ERCC1.
    Nucleic Acids Res. 1992 Dec 11;20(23):6347-53 PMID: 1475195
  42. Sequencing and characterization of the sdaB gene from Escherichia coli K-12.
    Eur J Biochem. 1993 Mar 15;212(3):777-84 PMID: 8385012
  43. DNA repair helicase: a component of BTF2 (TFIIH) basic transcription factor.
    Science. 1993 Apr 2;260(5104):58-63 PMID: 8465201
  44. Yeast DNA repair and recombination proteins Rad1 and Rad10 constitute a single-stranded-DNA endonuclease.
    Nature. 1993 Apr 29;362(6423):860-2 PMID: 8479526
  45. Augmentation of protein production by a combination of the T7 RNA polymerase system and ubiquitin fusion: overproduction of the human DNA repair protein, ERCC1, as a ubiquitin fusion protein in Escherichia coli.
    Biochem Biophys Res Commun. 1993 Sep 15;195(2):643-53 PMID: 8396922
  46. Evidence that the Rad1 and Rad10 proteins of Saccharomyces cerevisiae participate as a complex in nucleotide excision repair of UV radiation damage.
    J Bacteriol. 1993 Oct;175(19):6345-7 PMID: 8407807
  47. Human xeroderma pigmentosum group D gene encodes a DNA helicase.
    Nature. 1993 Oct 28;365(6449):852-5 PMID: 8413672
  48. Conserved sites in the 5'-3' exonuclease domain of Escherichia coli DNA polymerase.
    Nucleic Acids Res. 1993 Sep 11;21(18):4406-7 PMID: 8415010
  49. Preferential binding of the xeroderma pigmentosum group A complementing protein to damaged DNA.
    Biochemistry. 1993 Nov 16;32(45):12096-104 PMID: 8218288
  50. Co-correction of the ERCC1, ERCC4 and xeroderma pigmentosum group F DNA repair defects in vitro.
    EMBO J. 1993 Sep;12(9):3685-92 PMID: 8253090
  51. Evidence for a repair enzyme complex involving ERCC1 and complementing activities of ERCC4, ERCC11 and xeroderma pigmentosum group F.
    EMBO J. 1993 Sep;12(9):3693-701 PMID: 8253091
  52. Purification and characterization of the Saccharomyces cerevisiae RAD1/RAD10 endonuclease.
    J Biol Chem. 1993 Dec 15;268(35):26391-9 PMID: 8253764
  53. The DNA-dependent ATPase activity associated with the class II basic transcription factor BTF2/TFIIH.
    J Biol Chem. 1994 Apr 1;269(13):9826-32 PMID: 7511595
  54. Dual role of TFIIH in DNA excision repair and in transcription by RNA polymerase II.
    Nature. 1994 Apr 21;368(6473):769-72 PMID: 8152490
  55. Purification of Rad1 protein from Saccharomyces cerevisiae and further characterization of the Rad1/Rad10 endonuclease complex.
    Biochemistry. 1994 May 3;33(17):5305-11 PMID: 8172904
  56. The ERCC2/DNA repair protein is associated with the class II BTF2/TFIIH transcription factor.
    EMBO J. 1994 May 15;13(10):2388-92 PMID: 8194528
  57. Specific association between the human DNA repair proteins XPA and ERCC1.
    Proc Natl Acad Sci U S A. 1994 May 24;91(11):5012-6 PMID: 8197174
  58. Formation of a ternary complex by human XPA, ERCC1, and ERCC4(XPF) excision repair proteins.
    Proc Natl Acad Sci U S A. 1994 May 24;91(11):5017-21 PMID: 8197175
  59. Structural and functional conservation of the human homolog of the Schizosaccharomyces pombe rad2 gene, which is required for chromosome segregation and recovery from DNA damage.
    Mol Cell Biol. 1994 Jul;14(7):4878-88 PMID: 8007985
  60. Messenger RNA levels of XPAC and ERCC1 in ovarian cancer tissue correlate with response to platinum-based chemotherapy.
    J Clin Invest. 1994 Aug;94(2):703-8 PMID: 8040325
  61. Single strand and double strand DNA damage-induced reciprocal recombination in yeast. Dependence on nucleotide excision repair and RAD1 recombination.
    Nucleic Acids Res. 1994 Jul 25;22(14):2823-9 PMID: 8052537
  62. Global regulation of expression of antifungal factors by a Pseudomonas fluorescens biological control strain.
    Mol Plant Microbe Interact. 1994 Jul-Aug;7(4):455-63 PMID: 8075420
  63. Specific cleavage of model recombination and repair intermediates by the yeast Rad1-Rad10 DNA endonuclease.
    Science. 1994 Sep 30;265(5181):2082-5 PMID: 8091230
  64. Functional domains within FEN-1 and RAD2 define a family of structure-specific endonucleases: implications for nucleotide excision repair.
    Genes Dev. 1994 Jun 1;8(11):1344-55 PMID: 7926735
  65. Excision repair in man and the molecular basis of xeroderma pigmentosum syndrome.
    Cold Spring Harb Symp Quant Biol. 1993;58:605-17 PMID: 7956075
  66. Structural and functional homology between mammalian DNase IV and the 5'-nuclease domain of Escherichia coli DNA polymerase I.
    J Biol Chem. 1994 Nov 18;269(46):28535-8 PMID: 7961795
  67. Complementation group assignments of moderately UV-sensitive CHO mutants isolated by large-scale screening (FAECB).
    Mutagenesis. 1994 Jul;9(4):301-6 PMID: 7968570
  68. Mutations in XPA that prevent association with ERCC1 are defective in nucleotide excision repair.
    Mol Cell Biol. 1995 Apr;15(4):1993-8 PMID: 7891694
  69. RAD1 and RAD10, but not other excision repair genes, are required for double-strand break-induced recombination in Saccharomyces cerevisiae.
    Mol Cell Biol. 1995 Apr;15(4):2245-51 PMID: 7891718
  70. RPA involvement in the damage-recognition and incision steps of nucleotide excision repair.
    Nature. 1995 Apr 6;374(6522):566-9 PMID: 7700386
  71. Nucleotide excision repair DNA synthesis by DNA polymerase epsilon in the presence of PCNA, RFC, and RPA.
    Biochemistry. 1995 Apr 18;34(15):5011-7 PMID: 7711023
  72. Human nucleotide excision repair syndromes: molecular clues to unexpected intricacies.
    Eur J Cancer. 1994;30A(13):1912-21 PMID: 7734202
  73. 2-Acetylaminofluorene-modified probes for the indirect hybridocytochemical detection of specific nucleic acid sequences.
    Exp Cell Res. 1984 Jul;153(1):61-72 PMID: 6203769
  74. Sequences of the E. coli uvrC gene and protein.
    Nucleic Acids Res. 1984 Jun 11;12(11):4593-608 PMID: 6330676
  75. Molecular cloning of a human DNA repair gene.
    Nature. 1984 Aug 2-8;310(5976):425-9 PMID: 6462228
  76. Nucleotide sequence of the RAD10 gene of Saccharomyces cerevisiae.
    EMBO J. 1985 Dec 16;4(13A):3549-52 PMID: 3912171
Article Info
Journal
Nucleic acids research
Abbr.
Nucleic Acids Res
ISSN
0305-1048
Published
1996-09-01
Pages
3370-80
Language
English
Region
England
NLM ID
0411011
PMCID
PMC146110
Subset
IM
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