Home LiteratureArticle Details
PMID: 3135182 Published · ppublish English Comparative Study Journal Article Research Support, Non-U.S. Gov't

Chicken immunoglobulin gamma-heavy chains: limited VH gene repertoire, combinatorial diversification by D gene segments and evolution of the heavy chain locus.

The EMBO journal ·Vol. 7 ·No. 3 ·1988-03-00 ·Pages 739-44

Parvari R, Avivi A, Lentner F, Ziv E, Tel-Or S, Burstein Y, Schechter I

Abstract

cDNA clones encoding the variable and constant regions of chicken immunoglobulin (Ig) gamma-chains were obtained from spleen cDNA libraries. Southern blots of kidney DNA show that the variable region sequences of eight cDNA clones reveal the same set of bands corresponding to approximately 30 cross-hybridizing VH genes of one subgroup. Since the VH clones were randomly selected, it is likely that the bulk of chicken H-chains are encoded by a single VH subgroup. Nucleotide sequence determinations of two cDNA clones reveal VH, D, JH and the constant region. The VH segments are closely related to each other (83% homology) as expected for VH or the same subgroup. The JHs are 15 residues long and differ by one amino acid. The Ds differ markedly in sequence (20% homology) and size (10 and 20 residues). These findings strongly indicate multiple (at least two) D genes which by a combinatorial joining mechanism diversify the H-chains, a mechanism which is not operative in the chicken L-chain locus. The most notable among the chicken Igs is the so-called 7S IgG because its H-chain differs in many important aspects from any mammalian IgG. The sequence of the C gamma cDNA reported here resolves this issue. The chicken C gamma is 426 residues long with four CH domains (unlike mammalian C gamma which has three CH domains) and it shows 25% homology to the chicken C mu. The chicken C gamma is most related to the mammalian C epsilon in length, the presence of four CH domains and the distribution of cysteines in the CH1 and CH2 domains. We propose that the unique chicken C gamma is the ancestor of the mammalian C epsilon and C gamma subclasses, and discuss the evolution of the H-chain locus from that of chicken with presumably three genes (mu, gamma, alpha) to the mammalian loci with 8-10 H-chain genes.

MeSH Terms
Amino Acid Sequence Animals Base Sequence Biological Evolution Chickens DNA/analysis,physiology Genes Humans Immunoglobulin Heavy Chains/genetics,physiology Mice Molecular Sequence Data Recombination, Genetic
Chemicals
Immunoglobulin Heavy Chains DNA
Authors & Affiliations
7 authors, click to expand affiliations / ORCID
Parvari R
Department of Chemical Immunology, Weizmann Institute of Science, Rehovot, Israel.
Avivi A
Lentner F
Ziv E
Tel-Or S
Burstein Y
Schechter I
References (32)
32 references, click to expand
  1. Phylogen of immunoglobulin structure and function. 3. Immunoglobulins of the chicken.
    J Exp Med. 1969 Dec 1;130(6):1337-52 PMID: 5352783
  2. Analyses of chicken immunoglobulin light chain cDNA clones indicate a few germline V lambda genes and allotypes of the C lambda locus.
    EMBO J. 1987 Jan;6(1):97-102 PMID: 3107981
  3. Complete amino acid sequence of the Mu heavy chain of a human IgM immunoglobulin.
    Science. 1973 Oct 19;182(4109):287-91 PMID: 4742735
  4. Variable region genes for the immunoglobulin framework are assembled from small segments of DNA--a hypothesis.
    Proc Natl Acad Sci U S A. 1978 May;75(5):2429-33 PMID: 97670
  5. Structure-function relationships in human immunoglobulin E.
    Immunol Rev. 1978;41:3-25 PMID: 100912
  6. Domains and the hinge region of an immunoglobulin heavy chain are encoded in separate DNA segments.
    Nature. 1979 Feb 22;277(5698):627-33 PMID: 106304
  7. Amino acid sequence of a mouse immunoglobulin mu chain.
    Proc Natl Acad Sci U S A. 1979 Jun;76(6):2932-6 PMID: 111247
  8. Cloning in single-stranded bacteriophage as an aid to rapid DNA sequencing.
    J Mol Biol. 1980 Oct 25;143(2):161-78 PMID: 6260957
  9. Human immunoglobulin D segments encoded in tandem multigenic families.
    Nature. 1981 Dec 17;294(5842):631-5 PMID: 7312051
  10. Amino acid sequence of the first constant region domain and the hinge region of the delta heavy chain of human IgD.
    Proc Natl Acad Sci U S A. 1981 Oct;78(10):6168-72 PMID: 6947220
  11. Organization, structure, and assembly of immunoglobulin heavy chain diversity DNA segments.
    J Exp Med. 1982 Jan 1;155(1):201-18 PMID: 6798155
  12. Somatic DNA rearrangement generates functional rat immunoglobulin kappa chain genes: the J kappa gene cluster is longer in rat than in mouse.
    Gene. 1982 May;18(2):165-74 PMID: 6290320
  13. Structure and evolution of the heavy chain from rat immunoglobulin E.
    Nucleic Acids Res. 1982 Oct 11;10(19):6041-9 PMID: 6292865
  14. Arrangement of human immunoglobulin heavy chain constant region genes implies evolutionary duplication of a segment containing gamma, epsilon and alpha genes.
    Nature. 1982 Dec 23;300(5894):709-13 PMID: 6817141
  15. Efficient isolation of genes by using antibody probes.
    Proc Natl Acad Sci U S A. 1983 Mar;80(5):1194-8 PMID: 6219389
  16. Rat immunoglobulin delta heavy chain gene: nucleotide sequence derived from cloned cDNA.
    Gene. 1982 Dec;20(3):377-86 PMID: 6819978
  17. Somatic generation of antibody diversity.
    Nature. 1983 Apr 14;302(5909):575-81 PMID: 6300689
  18. Nucleotide sequence of the constant region of a chicken mu heavy chain immunoglobulin mRNA.
    Nucleic Acids Res. 1983 Aug 25;11(16):5381-9 PMID: 6310496
  19. The molecular biology of immunoglobulin D.
    Nature. 1984 Feb 2-8;307(5950):417-22 PMID: 6420708
  20. Immunoglobulin V region variants in hybridoma cells. II. Recombination between V genes.
    EMBO J. 1982;1(5):635-40 PMID: 7188353
  21. The sequence of a human immunoglobulin epsilon heavy chain constant region gene, and evidence for three non-allelic genes.
    EMBO J. 1982;1(5):655-60 PMID: 6234164
  22. The nucleotide sequence of the mouse immunoglobulin epsilon gene: comparison with the human epsilon gene sequence.
    EMBO J. 1982;1(9):1117-23 PMID: 6329728
  23. Concerted evolution of the mouse immunoglobulin gamma chain genes.
    EMBO J. 1984 Sep;3(9):2047-53 PMID: 6436019
  24. A single rearrangement event generates most of the chicken immunoglobulin light chain diversity.
    Cell. 1985 Feb;40(2):283-91 PMID: 3917859
  25. Complete nucleotide sequences of three VH genes in Caiman, a phylogenetically ancient reptile: evolutionary diversification in coding segments and variation in the structure and organization of recombination elements.
    Proc Natl Acad Sci U S A. 1985 Feb;82(3):844-8 PMID: 2983316
  26. Possible involvement of human D minigenes in the first complementarity-determining region of kappa light chains.
    Proc Natl Acad Sci U S A. 1985 Apr;82(7):2125-7 PMID: 3920660
  27. Sequence of a human immunoglobulin gamma 3 heavy chain constant region gene: comparison with the other human C gamma genes.
    Nucleic Acids Res. 1986 Feb 25;14(4):1779-89 PMID: 3081877
  28. Rearrangement of chicken immunoglobulin genes is not an ongoing process in the embryonic bursa of Fabricius.
    Proc Natl Acad Sci U S A. 1986 May;83(10):3336-40 PMID: 3010290
  29. Counting components of the chicken's B cell system.
    Immunol Rev. 1986 Jun;91:115-28 PMID: 3488258
  30. Recombination between an expressed immunoglobulin heavy-chain gene and a germline variable gene segment in a Ly 1+ B-cell lymphoma.
    Nature. 1986 Aug 28-Sep 3;322(6082):843-6 PMID: 3092106
  31. A hyperconversion mechanism generates the chicken light chain preimmune repertoire.
    Cell. 1987 Feb 13;48(3):379-88 PMID: 3100050
  32. Immunoglobulin A: site and sequence of expression in developing chicks.
    Science. 1973 Jan 26;179(4071):398-400 PMID: 4566557
Article Info
Journal
The EMBO journal
Abbr.
EMBO J
ISSN
0261-4189
Published
1988-03-00
Pages
739-44
Language
English
Region
England
NLM ID
8208664
PMCID
PMC454383
Subset
IM
Databases
GENBANK
X07174, X07175, X07176
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]