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PMID: 32226081 Published · ppublish English Journal Article

Plagues and adaptation: Lessons from the Felidae models for SARS and AIDS.

Biological conservation ·Vol. 131 ·No. 2 ·2006-08-00 ·Pages 255-267

O'Brien SJ, Troyer JL, Roelke M, Marker L, Pecon-Slattery J

Abstract

Research studies of infectious disease outbreaks in wild species of the cat family Felidae have revealed unusual details regarding forces that shape population survival and genetic resistance in these species. A highly virulent feline coronavirus epidemic in African cheetahs, a disease model for human SARS, illustrates the critical role of ancestral population genetic variation. Widespread prevalence of species specific feline immunodeficiency virus (FIV), a relative of HIV-AIDS, occurs with little pathogenesis in felid species, except in domestic cats, suggesting immunological adaptation in species where FIV is endemic. Resolving the interaction of host and pathogen genomes can shed new light on the process of disease outbreak in wildlife and in humankind. The role of disease in endangered populations and species is difficult to access as opportunities to monitor outbreaks in natural populations are limited. Conservation management may benefit greatly from advances in molecular genetic tools developed for human biomedical research to assay the biodiversity of both host species and emerging pathogen. As these examples illustrate, strong parallels exist between disease in human and endangered wildlife and argue for an integration of the research fields of comparative genomics, infectious disease, epidemiology, molecular genetics and population biology for an effective proactive conservation approach.

Keywords
AIDS CDV FIV SARS
Authors & Affiliations
5 authors, click to expand affiliations / ORCID
O'Brien Stephen J
Laboratory of Genomic Diversity, National Cancer Institute, Building 560, Room 21-105, Frederick, MD 21702, USA.
Troyer Jennifer L
Laboratory of Genomic Diversity, SAIC-Frederick, NCI-Frederick, Frederick MD USA.
Roelke Melody
Laboratory of Genomic Diversity, SAIC-Frederick, NCI-Frederick, Frederick MD USA.
Marker Laurie
Cheetah Conservation Fund, Namibia, Southwest Africa.
Pecon-Slattery Jill
Laboratory of Genomic Diversity, National Cancer Institute, Building 560, Room 21-105, Frederick, MD 21702, USA.
References (79)
79 references, click to expand
  1. Update: severe acute respiratory syndrome--worldwide and United States, 2003.
    MMWR Morb Mortal Wkly Rep. 2003 Jul 18;52(28):664-5 PMID: 12869906
  2. Clustering patterns of cytotoxic T-lymphocyte epitopes in human immunodeficiency virus type 1 (HIV-1) proteins reveal imprints of immune evasion on HIV-1 global variation.
    J Virol. 2002 Sep;76(17):8757-68 PMID: 12163596
  3. A virus reveals population structure and recent demographic history of its carnivore host.
    Science. 2006 Jan 27;311(5760):538-41 PMID: 16439664
  4. Ecological change, group territoriality, and population dynamics in Serengeti lions.
    Science. 2005 Jan 21;307(5708):390-3 PMID: 15662005
  5. What can natural infection of African monkeys with simian immunodeficiency virus tell us about the pathogenesis of AIDS?
    AIDS Rev. 2004 Jan-Mar;6(1):40-53 PMID: 15168740
  6. Nucleotide sequence analysis of feline immunodeficiency virus: genome organization and relationship to other lentiviruses.
    Proc Natl Acad Sci U S A. 1989 Oct;86(20):8088-92 PMID: 2813380
  7. SARS-associated coronavirus.
    N Engl J Med. 2003 May 15;348(20):1948-51 PMID: 12748314
  8. The N-terminal octapeptide acts as a dimerization inhibitor of SARS coronavirus 3C-like proteinase.
    Biochem Biophys Res Commun. 2006 Jan 20;339(3):865-72 PMID: 16329994
  9. Analytical DNA fingerprinting in lions: parentage, genetic diversity, and kinship.
    J Hered. 1991 Sep-Oct;82(5):378-86 PMID: 1940281
  10. Seroprevalence and genomic divergence of circulating strains of feline immunodeficiency virus among Felidae and Hyaenidae species.
    J Virol. 2005 Jul;79(13):8282-94 PMID: 15956574
  11. T-lymphocyte profiles in FIV-infected wild lions and pumas reveal CD4 depletion.
    J Wildl Dis. 2006 Apr;42(2):234-48 PMID: 16870846
  12. Evolution of mammalian genome organization inferred from comparative gene mapping.
    Genome Biol. 2001;2(6):REVIEWS0005 PMID: 11423011
  13. Isolation and characterization of viruses related to the SARS coronavirus from animals in southern China.
    Science. 2003 Oct 10;302(5643):276-8 PMID: 12958366
  14. The 2003 SARS outbreak and its impact on infection control practices.
    Public Health. 2006 Jan;120(1):8-14 PMID: 16297415
  15. A lion lentivirus related to feline immunodeficiency virus: epidemiologic and phylogenetic aspects.
    J Virol. 1994 Sep;68(9):5953-68 PMID: 8057472
  16. Genetic diversity affects testicular morphology in free-ranging lions (Panthera leo) of the Serengeti Plains and Ngorongoro Crater.
    J Reprod Fertil. 1996 Sep;108(1):11-5 PMID: 8958822
  17. Comparative primate genomics.
    Annu Rev Genomics Hum Genet. 2004;5:351-78 PMID: 15485353
  18. HIV and host immune responses in AIDS pathogenesis.
    J Clin Apher. 1993;8(1):19-28 PMID: 8505278
  19. The consequences of demographic reduction and genetic depletion in the endangered Florida panther.
    Curr Biol. 1993 Jun 1;3(6):340-50 PMID: 15335727
  20. AIDS as a zoonosis: scientific and public health implications.
    Science. 2000 Jan 28;287(5453):607-14 PMID: 10649986
  21. Conservation genetics of the Far Eastern leopard (Panthera pardus orientalis).
    J Hered. 2002 Sep-Oct;93(5):303-11 PMID: 12547918
  22. The influence of HLA genotype on AIDS.
    Annu Rev Med. 2003;54:535-51 PMID: 12525683
  23. Genomic microsatellites as evolutionary chronometers: a test in wild cats.
    Genome Res. 2002 Mar;12(3):414-23 PMID: 11875029
  24. Expanding the frontiers of existing antiviral drugs: possible effects of HIV-1 protease inhibitors against SARS and avian influenza.
    J Clin Virol. 2005 Nov;34(3):170-8 PMID: 15893956
  25. Phylogeography and genetic ancestry of tigers (Panthera tigris).
    PLoS Biol. 2004 Dec;2(12):e442 PMID: 15583716
  26. Characterization of evolutionary rates and constraints in three Mammalian genomes.
    Genome Res. 2004 Apr;14(4):539-48 PMID: 15059994
  27. Molecular phylogenetics and the origins of placental mammals.
    Nature. 2001 Feb 1;409(6820):614-8 PMID: 11214319
  28. SARS--looking back over the first 100 days.
    N Engl J Med. 2003 Jul 24;349(4):319-20 PMID: 12878735
  29. Lentivirus infection in an African lion: a clinical, pathologic and virologic study.
    J Wildl Dis. 1995 Jan;31(1):70-4 PMID: 7563428
  30. Genetic and phylogenetic divergence of feline immunodeficiency virus in the puma (Puma concolor).
    J Virol. 1996 Oct;70(10):6682-93 PMID: 8794304
  31. The HIV-1 envelope glycoproteins: fusogens, antigens, and immunogens.
    Science. 1998 Jun 19;280(5371):1884-8 PMID: 9632381
  32. Marsupial MHC class II beta genes are not orthologous to the eutherian beta gene families.
    J Hered. 2004 Jul-Aug;95(4):338-45 PMID: 15247314
  33. Severe acute respiratory syndrome: identification of the etiological agent.
    Trends Mol Med. 2003 Aug;9(8):325-7 PMID: 12928032
  34. Genetic basis for species vulnerability in the cheetah.
    Science. 1985 Mar 22;227(4693):1428-34 PMID: 2983425
  35. Simian immunodeficiency virus infection of chimpanzees.
    J Virol. 2005 Apr;79(7):3891-902 PMID: 15767392
  36. Genomic ancestry of the American puma (Puma concolor).
    J Hered. 2000 May-Jun;91(3):186-97 PMID: 10833043
  37. Comparison of fine-scale recombination rates in humans and chimpanzees.
    Science. 2005 Apr 1;308(5718):107-11 PMID: 15705809
  38. Human infection by genetically diverse SIVSM-related HIV-2 in west Africa.
    Nature. 1992 Aug 6;358(6386):495-9 PMID: 1641038
  39. Prevalence and implications of feline coronavirus infections of captive and free-ranging cheetahs (Acinonyx jubatus).
    J Virol. 1990 May;64(5):1964-72 PMID: 2157864
  40. Coadaptation and immunodeficiency virus: lessons from the Felidae.
    Curr Opin Genet Dev. 1995 Dec;5(6):739-45 PMID: 8745072
  41. Timing the ancestor of the HIV-1 pandemic strains.
    Science. 2000 Jun 9;288(5472):1789-96 PMID: 10846155
  42. Genetic characterization of canine distemper virus in Serengeti carnivores.
    Vet Immunol Immunopathol. 1998 Oct 23;65(2-4):259-66 PMID: 9839878
  43. Two amino acid changes at the N-terminus of transmissible gastroenteritis coronavirus spike protein result in the loss of enteric tropism.
    Virology. 1997 Jan 20;227(2):378-88 PMID: 9018137
  44. Sequential CD134-CXCR4 interactions in feline immunodeficiency virus (FIV): soluble CD134 activates FIV Env for CXCR4-dependent entry and reveals a cryptic neutralization epitope.
    J Virol. 2006 Mar;80(6):3088-91 PMID: 16501119
  45. Species-specific diversity among simian immunodeficiency viruses from African green monkeys.
    J Virol. 1991 Jun;65(6):2816-28 PMID: 2033656
  46. Big cat genomics.
    Annu Rev Genomics Hum Genet. 2005;6:407-29 PMID: 16124868
  47. Comparative genome organization of human, murine, and feline MHC class II region.
    Genome Res. 2003 Jun;13(6A):1169-79 PMID: 12743023
  48. Severe acute respiratory syndrome coronavirus-like virus in Chinese horseshoe bats.
    Proc Natl Acad Sci U S A. 2005 Sep 27;102(39):14040-5 PMID: 16169905
  49. Mammalian phylogenomics comes of age.
    Trends Genet. 2004 Dec;20(12):631-9 PMID: 15522459
  50. Origins and evolution of AIDS viruses.
    Biol Bull. 1999 Jun;196(3):338-42 PMID: 10390833
  51. Risk factors for feline infectious peritonitis among cats in multiple-cat environments with endemic feline enteric coronavirus.
    J Am Vet Med Assoc. 1997 May 1;210(9):1313-8 PMID: 9143536
  52. The promise of comparative genomics in mammals.
    Science. 1999 Oct 15;286(5439):458-62, 479-81 PMID: 10521336
  53. Origin of HIV-1 in the chimpanzee Pan troglodytes troglodytes.
    Nature. 1999 Feb 4;397(6718):436-41 PMID: 9989410
  54. Molecular insights into human brain evolution.
    Nature. 2005 Sep 1;437(7055):64-7 PMID: 16136130
  55. Identification of a novel coronavirus in bats.
    J Virol. 2005 Feb;79(4):2001-9 PMID: 15681402
  56. Patterns of feline immunodeficiency virus multiple infection and genome divergence in a free-ranging population of African lions.
    J Virol. 2004 Apr;78(7):3777-91 PMID: 15016897
  57. Targeted recombination demonstrates that the spike gene of transmissible gastroenteritis coronavirus is a determinant of its enteric tropism and virulence.
    J Virol. 1999 Sep;73(9):7607-18 PMID: 10438851
  58. Comparative genome organization of the major histocompatibility complex: lessons from the Felidae.
    Immunol Rev. 1999 Feb;167:133-44 PMID: 10319256
  59. Phylogenetics, genome diversity and origin of modern leopard, Panthera pardus.
    Mol Ecol. 2001 Nov;10(11):2617-33 PMID: 11883877
  60. A canine distemper virus epidemic in Serengeti lions (Panthera leo).
    Nature. 1996 Feb 1;379(6564):441-5 PMID: 8559247
  61. Current HIV treatment guidelines--an overview.
    Curr Pharm Des. 2006;12(9):1045-63 PMID: 16515485
  62. The genome of feline immunodeficiency virus.
    Arch Virol. 1994;134(3-4):221-34 PMID: 8129613
  63. DNA variation of the mammalian major histocompatibility complex reflects genomic diversity and population history.
    Proc Natl Acad Sci U S A. 1990 Jan;87(2):836-40 PMID: 1967831
  64. East African cheetahs: evidence for two population bottlenecks?
    Proc Natl Acad Sci U S A. 1987 Jan;84(2):508-11 PMID: 3467370
  65. Genomic organization of the mammalian MHC.
    Annu Rev Immunol. 2003;21:629-57 PMID: 12500978
  66. FIV infection of the domestic cat: an animal model for AIDS.
    Immunol Today. 1997 Apr;18(4):182-9 PMID: 9136455
  67. Feline immunodeficiency virus: an interesting model for AIDS studies and an important cat pathogen.
    Clin Microbiol Rev. 1995 Jan;8(1):87-112 PMID: 7704896
  68. Biological and pathological consequences of feline infectious peritonitis virus infection in the cheetah.
    Arch Virol. 1988;102(3-4):155-71 PMID: 2849387
  69. Epidemiology of an intestinal parasite (Spirometra spp.) in two populations of African lions (Panthera leo).
    Parasitology. 1999 Apr;118 ( Pt 4):407-15 PMID: 10340332
  70. Cross-host evolution of severe acute respiratory syndrome coronavirus in palm civet and human.
    Proc Natl Acad Sci U S A. 2005 Feb 15;102(7):2430-5 PMID: 15695582
  71. Isolation of a T-lymphotropic virus from domestic cats with an immunodeficiency-like syndrome.
    Science. 1987 Feb 13;235(4790):790-3 PMID: 3643650
  72. The late Miocene radiation of modern Felidae: a genetic assessment.
    Science. 2006 Jan 6;311(5757):73-7 PMID: 16400146
  73. Coronavirus outbreak in cheetahs: lessons for SARS.
    Curr Biol. 2004 Mar 23;14(6):R227-8 PMID: 15043830
  74. Prevalence of antibodies to feline parvovirus, calicivirus, herpesvirus, coronavirus, and immunodeficiency virus and of feline leukemia virus antigen and the interrelationship of these viral infections in free-ranging lions in east Africa.
    Clin Diagn Lab Immunol. 1996 Sep;3(5):554-62 PMID: 8877134
  75. Bats are natural reservoirs of SARS-like coronaviruses.
    Science. 2005 Oct 28;310(5748):676-9 PMID: 16195424
  76. Epidemiology, genetic diversity, and evolution of endemic feline immunodeficiency virus in a population of wild cougars.
    J Virol. 2003 Sep;77(17):9578-89 PMID: 12915571
  77. Dating the genetic bottleneck of the African cheetah.
    Proc Natl Acad Sci U S A. 1993 Apr 15;90(8):3172-6 PMID: 8475057
  78. Worldwide prevalence of lentivirus infection in wild feline species: epidemiologic and phylogenetic aspects.
    J Virol. 1992 Oct;66(10):6008-18 PMID: 1382145
  79. Inferring nonneutral evolution from human-chimp-mouse orthologous gene trios.
    Science. 2003 Dec 12;302(5652):1960-3 PMID: 14671302
Article Info
Journal
Biological conservation
Abbr.
Biol Conserv
ISSN
0006-3207
Published
2006-08-00
Epub
2006-00-06
Pages
255-267
Language
English
Region
England
NLM ID
7502018
PMCID
PMC7096731
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