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PMID: 3903436 Published · ppublish English Journal Article Research Support, U.S. Gov't, Non-P.H.S. Research Support, U.S. Gov't, P.H.S.

First identification of an amber nonsense mutation in Schizosaccharomyces pombe: major differences in the efficiency of homologous versus heterologous yeast suppressor tRNA genes.

Molecular & general genetics : MGG ·Vol. 201 ·No. 1 ·1985-00-00 ·Pages 82-7

Krupp G, Thurianx P, Willis I, Gamulin V, Söll D

Abstract

In Saccharomyces cerevisiae ochre and opal, as well as amber mutations are known, whereas in the fission yeast Schizosaccharomyces pombe no amber alleles have been described. We have characterized trp1-566, an amber allele in the trp1 locus of S. pombe. The identification of trp1-566 as an amber allele is based on the following results: (a) The nonsense allele can be converted to an ochre allele by nitrosoguanidine mutagenesis. (b) trp1-566 is suppressed by a bona fide S. pombe amber suppressor tRNA, supSI. The supSI gene was obtained by primer-directed in vitro mutagenesis of a tRNASer from S. pombe. Unexpectedly, an S. cerevisiae amber suppressor tRNASer, supR21, transformed into S. pombe, failed to suppress trp1-566. Northern analysis of S. pombe transformants, containing supRL1 or S. cerevisiae tRNALeu or tRNATyr genes reveals that these genes are not transcribed in the fission yeast. As an additional tool for the analysis of nonsense mutations in S. pombe, we obtained by nitrosoguanidine mutagenesis two unlinked amber suppressor alleles, sup13 and sup14, which act on trp1-566.

MeSH Terms
Base Sequence Escherichia coli/genetics Genes, Fungal Mutation Nucleic Acid Hybridization Plasmids RNA, Transfer/genetics Saccharomycetales/genetics Schizosaccharomyces/genetics Species Specificity Suppression, Genetic
Chemicals
RNA, Transfer
Authors & Affiliations
5 authors, click to expand affiliations / ORCID
Krupp G
Thurianx P
Willis I
Gamulin V
Söll D
References (29)
29 references, click to expand
  1. A conversational system for the computer analysis of nucleic acid sequences.
    Nucleic Acids Res. 1981 Jan 24;9(2):437-44 PMID: 6163137
  2. The yeast cloning vector YEp13 contains a tRNALeu3 gene that can mutate to an amber suppressor.
    Gene. 1984 Mar;27(3):239-51 PMID: 6329904
  3. Translational efficiency of transfer RNA's: uses of an extended anticodon.
    Science. 1982 Nov 12;218(4573):646-52 PMID: 6753149
  4. Organisation of the complex locus trp1 in the fission yeast Schizosaccharomyces pombe.
    Curr Genet. 1982 Oct;6(1):13-8 PMID: 24186364
  5. The extent of a eukaryotic tRNA gene. 5'- and 3'-flanking sequence dependence for transcription and stable complex formation.
    J Biol Chem. 1984 Feb 10;259(3):1461-7 PMID: 6693417
  6. The presence of a defective LEU2 gene on 2 mu DNA recombinant plasmids of Saccharomyces cerevisiae is responsible for curing and high copy number.
    J Bacteriol. 1983 Nov;156(2):625-35 PMID: 6313610
  7. Genetics of the fission yeast Schizosaccharomyces pombe.
    Annu Rev Genet. 1980;14:77-108 PMID: 7011176
  8. High-frequency transformation of the fission yeast Schizosaccharomyces pombe.
    Nature. 1981 Mar 12;290(5802):140-2 PMID: 22442847
  9. Nonsense suppression in Schizosaccharomyces pombe: the S. pombe Sup3-e tRNASerUGA gene is active in S. cerevisiae.
    Mol Gen Genet. 1982;188(2):219-24 PMID: 6818425
  10. Nucleotide sequence of a mutant eukaryotic gene: the yeast tyrosine-inserting ochre suppressor SUP4-o.
    Proc Natl Acad Sci U S A. 1977 Dec;74(12):5453-7 PMID: 341157
  11. Effects of altered 5'-flanking sequences on the in vivo expression of a Saccharomyces cerevisiae tRNATyr gene.
    Mol Cell Biol. 1984 Apr;4(4):657-65 PMID: 6371493
  12. Transcription and processing of cloned yeast tyrosine tRNA genes microinjected into frog oocytes.
    Nature. 1979 Mar 8;278(5700):137-43 PMID: 368655
  13. The sup8 tRNALeu gene of Schizosaccharomyces pombe has an unusual intervening sequence and reduced pairing in the anticodon stem.
    Mol Gen Genet. 1984;197(3):447-52 PMID: 6597338
  14. Oligonucleotide-directed mutagenesis using M13-derived vectors: an efficient and general procedure for the production of point mutations in any fragment of DNA.
    Nucleic Acids Res. 1982 Oct 25;10(20):6487-500 PMID: 6757864
  15. Only one of two closely related yeast suppressor tRNA genes contains an intervening sequence.
    Nature. 1981 Jun 11;291(5815):464-9 PMID: 6262655
  16. Internal control regions for transcription of eukaryotic tRNA genes.
    Proc Natl Acad Sci U S A. 1981 Nov;78(11):6657-61 PMID: 6947245
  17. A split promoter for a eucaryotic tRNA gene.
    Cell. 1981 May;24(2):573-85 PMID: 7237560
  18. Replicating plasmids in Schizosaccharomyces pombe: improvement of symmetric segregation by a new genetic element.
    Mol Cell Biol. 1986 Jan;6(1):80-9 PMID: 3023839
  19. The 5- flanking sequences of Drosophila tRNAArg genes control their in vitro transcription in a Drosophila cell extract.
    J Biol Chem. 1982 Dec 25;257(24):14738-44 PMID: 6924656
  20. Mutations affecting excision of the intron from a eukaryotic dimeric tRNA precursor.
    EMBO J. 1984 Jul;3(7):1573-80 PMID: 6430697
  21. Plasmids carrying the yeast OMP decarboxylase structural and regulatory genes: transcription regulation in a foreign environment.
    Cell. 1983 Feb;32(2):371-7 PMID: 6337726
  22. The Schizosaccharomyces pombe sup3-i suppressor recognizes ochre, but not amber codons in vitro and in vivo.
    EMBO J. 1984 Feb;3(2):423-8 PMID: 6370683
  23. Identification of regulatory sequences contained in the 5'-flanking region of Drosophila lysine tRNA2 genes.
    J Biol Chem. 1981 Dec 10;256(23):12424-9 PMID: 6913581
  24. Transformation in yeast: development of a hybrid cloning vector and isolation of the CAN1 gene.
    Gene. 1979 Dec;8(1):121-33 PMID: 395029
  25. Some bacterial tRNA genes are transcribed by eukaryotic RNA polymerase III.
    Nucleic Acids Res. 1982 Nov 25;10 (22):7153-62 PMID: 6185920
  26. Six Schizosaccharomyces pombe tRNA genes including a gene for a tRNALys with an intervening sequence which cannot base-pair with the anticodon.
    Nucleic Acids Res. 1983 Dec 20;11(24):8537-46 PMID: 6561518
  27. Genetic analysis of antisuppressor mutants in the fission yeast Schizosaccharomyces pombe.
    Mol Gen Genet. 1976 Dec 31;142(4):251-61 PMID: 1272244
  28. Construction of a Schizosaccharomyces pombe gene bank in a yeast bacterial shuttle vector and its use to isolate genes by complementation.
    Mol Gen Genet. 1982;187(2):326-9 PMID: 6294466
  29. A method for sequencing single-stranded cloned DNA in both directions.
    Biosci Rep. 1981 Mar;1(3):243-52 PMID: 6271278
Article Info
Journal
Molecular & general genetics : MGG
Abbr.
Mol Gen Genet
ISSN
0026-8925
Published
1985-00-00
Pages
82-7
Language
English
Region
Germany
NLM ID
0125036
Subset
IM
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