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PMID: 8102362 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, P.H.S.

Identification and transcriptional analysis of the Escherichia coli htrE operon which is homologous to pap and related pilin operons.

Journal of bacteriology ·Vol. 175 ·No. 16 ·1993-08-00 ·Pages 5009-21

Raina S, Missiakas D, Baird L, Kumar S, Georgopoulos C

Abstract

We have characterized a new Escherichia coli operon consisting of two genes, ecpD and htrE. The ecpD gene encodes a 27-kDa protein which is 40% identical at the amino acid level to the pilin chaperone PapD family of proteins. Immediately downstream of the ecpD gene is the htrE gene. The htrE gene encodes a polypeptide of 95 kDa which is processed to a 92-kDa mature species. The HtrE protein is 38% identical to the type II pilin porin protein PapC. The ecpD htrE operon is located at 3.3 min on the genetic map, corresponding to the region from kbp 153 to 157 of the E. coli physical map. The htrE gene was identified on the basis of a Tn5 insertion mutation which resulted in a temperature-sensitive growth phenotype above 43.5 degrees C. The transcription of this operon is induced with a temperature shift from 22 to 37 or 42 degrees C but not to higher temperatures, e.g., 50 degrees C. Consistent with this result, the temperature-induced transcription was shown to be independent of the rpoH gene product (sigma 32). The transcription of this operon was further shown to require functional integration host factor protein, since himA or himD mutant bacteria possessed lower levels of ecpD htrE transcripts. Among the three transcriptional start sites discovered, one, defined by the P2 promoter, was found to be under the positive regulation of the katF (rpoS) gene, which encodes a putative sigma factor required for the transcription of many growth phase-regulated genes.

MeSH Terms
Adhesins, Escherichia coli Amino Acid Sequence Bacterial Outer Membrane Proteins/genetics Bacterial Proteins/genetics Base Sequence Chaperonins Chromosome Mapping Cloning, Molecular Escherichia coli/genetics Escherichia coli Proteins Fimbriae Proteins Gene Expression Regulation, Bacterial Integration Host Factors Molecular Chaperones Molecular Sequence Data Mutagenesis Operon/genetics Proteins/genetics RNA Precursors/genetics Sequence Analysis, DNA Sequence Homology, Amino Acid Sigma Factor/genetics Transcription, Genetic
Chemicals
Adhesins, Escherichia coli Bacterial Outer Membrane Proteins Bacterial Proteins Escherichia coli Proteins Integration Host Factors Molecular Chaperones Proteins RNA Precursors Sigma Factor ecpD protein, E coli htrE protein, E coli sigma factor KatF protein, Bacteria Fimbriae Proteins Chaperonins
Authors & Affiliations
5 authors, click to expand affiliations / ORCID
Raina S
Department of Cellular, Viral and Molecular Biology, University of Utah School of Medicine, Salt Lake City 84132.
Missiakas D
Baird L
Kumar S
Georgopoulos C
References (40)
40 references, click to expand
  1. A rapid and efficient method for transcript mapping.
    Nucleic Acids Res. 1990 Oct 25;18(20):6159 PMID: 2235519
  2. Genes on the 90-kilobase plasmid of Salmonella typhimurium confer low-affinity cobalamin transport: relationship to fimbria biosynthesis genes.
    J Bacteriol. 1990 Nov;172(11):6217-22 PMID: 1977735
  3. The putative sigma factor KatF has a central role in development of starvation-mediated general resistance in Escherichia coli.
    J Bacteriol. 1991 Jul;173(13):4188-94 PMID: 2061293
  4. Growth phase-regulated expression of bolA and morphology of stationary-phase Escherichia coli cells are controlled by the novel sigma factor sigma S.
    J Bacteriol. 1991 Jul;173(14):4474-81 PMID: 1648559
  5. The htrM gene, whose product is essential for Escherichia coli viability only at elevated temperatures, is identical to the rfaD gene.
    Nucleic Acids Res. 1991 Jul 25;19(14):3811-9 PMID: 1861974
  6. Immunoglobulin-like PapD chaperone caps and uncaps interactive surfaces of nascently translocated pilus subunits.
    Proc Natl Acad Sci U S A. 1991 Dec 1;88(23):10586-90 PMID: 1683704
  7. Chaperone-assisted assembly and molecular architecture of adhesive pili.
    Annu Rev Microbiol. 1991;45:383-415 PMID: 1683764
  8. Trehalose synthesis genes are controlled by the putative sigma factor encoded by rpoS and are involved in stationary-phase thermotolerance in Escherichia coli.
    J Bacteriol. 1991 Dec;173(24):7918-24 PMID: 1744047
  9. Conserved immunoglobulin-like features in a family of periplasmic pilus chaperones in bacteria.
    EMBO J. 1992 Apr;11(4):1617-22 PMID: 1348692
  10. Leucine-responsive regulatory protein controls the expression of both the pap and fan pili operons in Escherichia coli.
    Proc Natl Acad Sci U S A. 1992 May 15;89(10):4250-4 PMID: 1350087
  11. Evidence for global regulatory control of pilus expression in Escherichia coli by Lrp and DNA methylation: model building based on analysis of pap.
    Mol Microbiol. 1992 Sep;6(17):2429-35 PMID: 1357527
  12. The Crl protein activates cryptic genes for curli formation and fibronectin binding in Escherichia coli HB101.
    Mol Microbiol. 1992 Sep;6(17):2443-52 PMID: 1357528
  13. The RpoS sigma factor relieves H-NS-mediated transcriptional repression of csgA, the subunit gene of fibronectin-binding curli in Escherichia coli.
    Mol Microbiol. 1993 Feb;7(4):523-36 PMID: 8459772
  14. Outer-membrane PapC molecular usher discriminately recognizes periplasmic chaperone-pilus subunit complexes.
    Proc Natl Acad Sci U S A. 1993 Apr 15;90(8):3670-4 PMID: 8097321
  15. The fimbrial and non-fimbrial haemagglutinins of Escherichia coli.
    J Med Microbiol. 1979 May;12(2):213-27 PMID: 379341
  16. Genetic and biochemical analysis of gonococcal IgA1 protease: cloning in Escherichia coli and construction of mutants of gonococci that fail to produce the activity.
    Proc Natl Acad Sci U S A. 1982 Dec;79(24):7881-5 PMID: 6818556
  17. Organization and expression of genes involved in the biosynthesis of K99 fimbriae.
    Infect Immun. 1984 Feb;43(2):508-14 PMID: 6141144
  18. Synergistic effect of himA and gyrB mutations: evidence that him functions control expression of ilv and xyl genes.
    J Bacteriol. 1984 Feb;157(2):484-9 PMID: 6229530
  19. A pSC101-derived plasmid which shows no sequence homology to other commonly used cloning vectors.
    Gene. 1984 Nov;31(1-3):165-71 PMID: 6098521
  20. The fim genes responsible for synthesis of type 1 fimbriae in Escherichia coli, cloning and genetic organization.
    Mol Gen Genet. 1985;199(3):410-4 PMID: 2863734
  21. An invertible element of DNA controls phase variation of type 1 fimbriae of Escherichia coli.
    Proc Natl Acad Sci U S A. 1985 Sep;82(17):5724-7 PMID: 2863818
  22. Regulation and structure of an Escherichia coli gene coding for an outer membrane protein involved in export of K88ab fimbrial subunits.
    Nucleic Acids Res. 1986 Mar 25;14(6):2443-57 PMID: 2870470
  23. The physical map of the whole E. coli chromosome: application of a new strategy for rapid analysis and sorting of a large genomic library.
    Cell. 1987 Jul 31;50(3):495-508 PMID: 3038334
  24. Interposon mutagenesis of soil and water bacteria: a family of DNA fragments designed for in vitro insertional mutagenesis of gram-negative bacteria.
    Gene. 1987;52(2-3):147-54 PMID: 3038679
  25. Fimbrial phase variation in Escherichia coli: dependence on integration host factor and homologies with other site-specific recombinases.
    J Bacteriol. 1987 Aug;169(8):3840-3 PMID: 2886490
  26. Isolation and characterization of a receptor for type 1 fimbriae of Escherichia coli from guinea pig erythrocytes.
    J Biol Chem. 1988 Apr 15;263(11):5362-7 PMID: 2895767
  27. Nucleotide sequence, regulation and functional analysis of the papC gene required for cell surface localization of Pap pili of uropathogenic Escherichia coli.
    Mol Microbiol. 1987 Sep;1(2):169-78 PMID: 2897064
  28. Genetics and sequence analysis of the pcnB locus, an Escherichia coli gene involved in plasmid copy number control.
    J Bacteriol. 1989 Mar;171(3):1254-61 PMID: 2537812
  29. Identification, characterization, and mapping of the Escherichia coli htrA gene, whose product is essential for bacterial growth only at elevated temperatures.
    J Bacteriol. 1989 Mar;171(3):1574-84 PMID: 2537822
  30. The nucleotide sequence of the fanD gene encoding the large outer membrane protein involved in the biosynthesis of K99 fimbriae.
    Nucleic Acids Res. 1989 Feb 11;17(3):1263 PMID: 2564179
  31. Fibronectin binding mediated by a novel class of surface organelles on Escherichia coli.
    Nature. 1989 Apr 20;338(6217):652-5 PMID: 2649795
  32. A collection of strains containing genetically linked alternating antibiotic resistance elements for genetic mapping of Escherichia coli.
    Microbiol Rev. 1989 Mar;53(1):1-24 PMID: 2540407
  33. PapD, a periplasmic transport protein in P-pilus biogenesis.
    J Bacteriol. 1989 Nov;171(11):6052-8 PMID: 2572580
  34. Crystal structure of chaperone protein PapD reveals an immunoglobulin fold.
    Nature. 1989 Nov 16;342(6247):248-51 PMID: 2478891
  35. tRNA hopping: enhancement by an expanded anticodon.
    EMBO J. 1989 Dec 20;8(13):4315-23 PMID: 2686986
  36. The fimD gene required for cell surface localization of Escherichia coli type 1 fimbriae.
    Mol Gen Genet. 1990 Jan;220(2):334-8 PMID: 1970114
  37. Transcriptional silencing and thermoregulation of gene expression in Escherichia coli.
    Nature. 1990 Apr 12;344(6267):682-5 PMID: 1691451
  38. A new Escherichia coli heat shock gene, htrC, whose product is essential for viability only at high temperatures.
    J Bacteriol. 1990 Jun;172(6):3417-26 PMID: 2160943
  39. Genetic determinants coding for fimbriae and adhesins of extraintestinal Escherichia coli.
    Curr Top Microbiol Immunol. 1990;151:1-27 PMID: 1973366
  40. Nucleotide sequence and functions of mrk determinants necessary for expression of type 3 fimbriae in Klebsiella pneumoniae.
    J Bacteriol. 1991 Jan;173(2):916-20 PMID: 1670938
Article Info
Journal
Journal of bacteriology
Abbr.
J Bacteriol
ISSN
0021-9193
Published
1993-08-00
Pages
5009-21
Language
English
Region
United States
NLM ID
2985120R
PMCID
PMC204966
Subset
IM
Grants
NIAID NIH HHS · AI21039 · United States
Databases
GENBANK
L00680
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