Home LiteratureArticle Details
PMID: 6328269 Published · ppublish English Journal Article Research Support, U.S. Gov't, P.H.S.

Transcription of the mouse ribosomal spacer region.

Molecular and cellular biology ·Vol. 4 ·No. 5 ·1984-05-00 ·Pages 822-8

Wood KM, Bowman LH, Thompson EA

Abstract

This paper describes experiments designed to test the hypothesis that DNA sequences upstream from the mouse rRNA promoter are transcribed in vivo or in vitro. Plasmid pB28 contains a SalI restriction fragment that extends from -169 to -1,894 base pairs, with respect to the origin of transcription of pre-rRNA. Labeled RNA synthesized in intact cells does not hybridize to this region. Neither S1 nuclease mapping nor RNA dot blot hybridization revealed the presence of sequences complementary to this region. Transcriptional studies carried out in vitro indicated that this region is not transcribed under conditions that are optimal for utilization of the authentic rRNA promoter. Moreover, this region does not appear to form stable transcription complexes with RNA polymerase I transcription components. These data indicate that the mouse rDNA repeating unit differs from those of Xenopus spp. and Drosophila melanogaster in that reduplicated RNA polymerase I promoters are not found in the mouse rDNA spacer region.

MeSH Terms
Animals Base Sequence Cell Line DNA/genetics DNA Restriction Enzymes DNA, Ribosomal Endonucleases Lymphoma, Non-Hodgkin Mice Nucleic Acid Hybridization Operon Plasmids RNA, Ribosomal/genetics Single-Strand Specific DNA and RNA Endonucleases Transcription, Genetic
Chemicals
DNA, Ribosomal RNA, Ribosomal DNA Endonucleases DNA Restriction Enzymes Single-Strand Specific DNA and RNA Endonucleases
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Wood K M
Bowman L H
Thompson E A
References (24)
24 references, click to expand
  1. Properties of a cell-culture line derived from lymphosarcoma P1798.
    Mol Cell Endocrinol. 1980 Feb;17(2):95-102 PMID: 6892700
  2. The genetic behaviour of a cloned mouse ribosomal DNA segment mimics mouse ribosomal gene evolution.
    J Mol Biol. 1979 Nov 15;134(4):743-63 PMID: 231673
  3. The putative promoter of a Xenopus laevis ribosomal gene is reduplicated.
    Nucleic Acids Res. 1979 Aug 24;6(12):3733-43 PMID: 493120
  4. Sequence organization of the spacer DNA in a ribosomal gene unit of Xenopus laevis.
    Cell. 1979 May;17(1):19-31 PMID: 455459
  5. Sizing and mapping of early adenovirus mRNAs by gel electrophoresis of S1 endonuclease-digested hybrids.
    Cell. 1977 Nov;12(3):721-32 PMID: 922889
  6. Labeling deoxyribonucleic acid to high specific activity in vitro by nick translation with DNA polymerase I.
    J Mol Biol. 1977 Jun 15;113(1):237-51 PMID: 881736
  7. Characterization of mouse ribosomal gene fragments purified by molecular cloning.
    Gene. 1979 Oct;7(2):83-96 PMID: 159852
  8. Sequencing end-labeled DNA with base-specific chemical cleavages.
    Methods Enzymol. 1980;65(1):499-560 PMID: 6246368
  9. Calcium protects DNase I from proteinase K: a new method for the removal of contaminating RNase from DNase I.
    Anal Biochem. 1980 Sep 1;107(1):260-4 PMID: 6254393
  10. The nucleotide sequence of the putative transcription initiation site of a cloned ribosomal RNA gene of the mouse.
    Nucleic Acids Res. 1980 Dec 20;8(24):6043-58 PMID: 6162156
  11. The nucleotide sequence of the initiation region of the ribosomal transcription unit from mouse.
    Nucleic Acids Res. 1981 Apr 10;9(7):1559-69 PMID: 6262732
  12. Specific transcription of mouse ribosomal DNA in a cell-free system that mimics control in vivo.
    Proc Natl Acad Sci U S A. 1981 Feb;78(2):727-31 PMID: 6262766
  13. Sequence organization of the spacer in the ribosomal genes of Xenopus clivii and Xenopus borealis.
    Nucleic Acids Res. 1981 Oct 24;9(20):5311-30 PMID: 6272218
  14. Studies on the selectivity of DNA precipitation by spermine.
    Nucleic Acids Res. 1981 Oct 24;9(20):5493-504 PMID: 7029471
  15. Transcription of mouse rRNA genes by RNA polymerase I: in vitro and in vivo initiation and processing sites.
    Cell. 1981 Nov;27(1 Pt 2):165-74 PMID: 7326749
  16. Stable transcription complexes of Xenopus 5S RNA genes: a means to maintain the differentiated state.
    Cell. 1982 Feb;28(2):413-21 PMID: 7060135
  17. Small nuclear RNAs are encoded in the nontranscribed region of ribosomal spacer DNA.
    Proc Natl Acad Sci U S A. 1982 May;79(10):3106-10 PMID: 6179077
  18. Hormonal regulation of transcription of rDNA. Inhibition of transcription during glucocorticoid-mediated inhibition of proliferation of lymphosarcoma P1798 cells in culture.
    J Biol Chem. 1983 Aug 25;258(16):9768-73 PMID: 6688417
  19. Transcription of the 'non-transcribed' spacer of Drosophila melanogaster rDNA.
    Nucleic Acids Res. 1983 Jan 11;11(1):11-9 PMID: 6306560
  20. A transcriptional function for the repetitive ribosomal spacer in Xenopus laevis.
    Nature. 1983 Mar 17-23;302(5905):223-8 PMID: 6835360
  21. Nucleotide sequence requirements for specific initiation of transcription by RNA polymerase I.
    Proc Natl Acad Sci U S A. 1982 Nov;79(22):6908-11 PMID: 6294665
  22. Multiple Pol I initiation sequences in rDNA spacers of Drosophila melanogaster.
    Nucleic Acids Res. 1982 Nov 11;10(21):7017-26 PMID: 6294625
  23. Nontranscribed spacer sequences promote in vitro transcription of Drosophila ribosomal DNA.
    Nucleic Acids Res. 1982 Nov 11;10(21):6879-86 PMID: 6817304
  24. Formation of stable preinitiation complexes is a prerequisite for ribosomal DNA transcription in vitro.
    Nucleic Acids Res. 1983 Jun 11;11(11):3795-809 PMID: 6856465
Article Info
Journal
Molecular and cellular biology
Abbr.
Mol Cell Biol
ISSN
0270-7306
Published
1984-05-00
Pages
822-8
Language
English
Region
United States
NLM ID
8109087
PMCID
PMC368820
Subset
IM
Grants
NIADDK NIH HHS · AM32221 · United States
NCI NIH HHS · CA22394 · United States
NCI NIH HHS · CA24347 · United States
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]