Home LiteratureArticle Details
PMID: 8534909 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, P.H.S.

Mutations in nucleolar proteins lead to nucleolar accumulation of polyA+ RNA in Saccharomyces cerevisiae.

Molecular biology of the cell ·Vol. 6 ·No. 9 ·1995-09-00 ·Pages 1103-10

Kadowaki T, Schneiter R, Hitomi M, Tartakoff AM

Abstract

Synthesis of mRNA and rRNA occur in the chromatin-rich nucleoplasm and the nucleolus, respectively. Nevertheless, we here report that a Saccharomyces cerevisiae gene, MTR3, previously implicated in mRNA transport, codes for a novel essential 28-kDa nucleolar protein. Moreover, in mtr3-1 the accumulated polyA+ RNA actually colocalizes with nucleolar antigens, the nucleolus becomes somewhat disorganized, and rRNA synthesis and processing are inhibited. A strain with a ts conditional mutation in RNA polymerase I also shows nucleolar accumulation of polyA+ RNA, whereas strains with mutations in the nucleolar protein Nop1p do not. Thus, in several mutant backgrounds, when mRNA cannot be exported i concentrates in the nucleolus. mRNA may normally encounter nucleolar components before export and proteins such as Mtr3p may be critical for export of both mRNA and ribosomal subunits.

MeSH Terms
Amino Acid Sequence Base Sequence Biological Transport Cell Nucleolus/metabolism Cloning, Molecular Exonucleases Exosome Multienzyme Ribonuclease Complex Fungal Proteins/genetics,metabolism Genes, Fungal Molecular Sequence Data Nuclear Proteins/genetics,metabolism RNA Polymerase II/metabolism RNA, Fungal/metabolism RNA, Messenger/metabolism RNA, Ribosomal/metabolism Saccharomyces cerevisiae/genetics,metabolism Saccharomyces cerevisiae Proteins
Chemicals
Fungal Proteins Nuclear Proteins RNA, Fungal RNA, Messenger RNA, Ribosomal Saccharomyces cerevisiae Proteins RNA Polymerase II Exonucleases Exosome Multienzyme Ribonuclease Complex MTR3 protein, S cerevisiae
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Kadowaki T
Department of Genetics, Harvard Medical School, Boston, Massachusetts 02115, USA.
Schneiter R
Hitomi M
Tartakoff A M
References (42)
42 references, click to expand
  1. The cytoplasmic maturation of a ribosomal precursor ribonucleic acid in yeast.
    J Biol Chem. 1973 Feb 25;248(4):1412-6 PMID: 4568815
  2. Further experiments on the role of the nucleolus in the expression of structural genes.
    J Cell Sci. 1972 Sep;11(2):379-91 PMID: 5076357
  3. The skipping of constitutive exons in vivo induced by nonsense mutations.
    Science. 1993 Jan 29;259(5095):680-3 PMID: 8430317
  4. The codon Adaptation Index--a measure of directional synonymous codon usage bias, and its potential applications.
    Nucleic Acids Res. 1987 Feb 11;15(3):1281-95 PMID: 3547335
  5. hnRNP I, the polypyrimidine tract-binding protein: distinct nuclear localization and association with hnRNAs.
    Nucleic Acids Res. 1992 Jul 25;20(14):3671-8 PMID: 1641332
  6. Pores for thought: nuclear pore complex proteins.
    Trends Cell Biol. 1994 Oct;4(10):357-65 PMID: 14731624
  7. Improved tools for biological sequence comparison.
    Proc Natl Acad Sci U S A. 1988 Apr;85(8):2444-8 PMID: 3162770
  8. Eucaryotic RNA polymerase conditional mutant that rapidly ceases mRNA synthesis.
    Mol Cell Biol. 1987 May;7(5):1602-11 PMID: 3299050
  9. Nonsense mutations inhibit splicing of MVM RNA in cis when they interrupt the reading frame of either exon of the final spliced product.
    Genes Dev. 1992 Jun;6(6):1107-19 PMID: 1592259
  10. The human immunodeficiency virus type 1 Rev protein shuttles between the cytoplasm and nuclear compartments.
    Mol Cell Biol. 1994 Nov;14(11):7436-44 PMID: 7935458
  11. Isolation and characterization of Saccharomyces cerevisiae mRNA transport-defective (mtr) mutants.
    J Cell Biol. 1994 Aug;126(3):649-59 PMID: 8045930
  12. Inhibition of yeast ribonucleic acid polymerases by thiolutin.
    J Bacteriol. 1973 Oct;116(1):245-56 PMID: 4583213
  13. An essential yeast gene with homology to the exonuclease-encoding XRN1/KEM1 gene also encodes a protein with exoribonuclease activity.
    Mol Cell Biol. 1993 Jan;13(1):341-50 PMID: 8417335
  14. A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae.
    Genetics. 1989 May;122(1):19-27 PMID: 2659436
  15. Discrete nuclear domains of poly(A) RNA and their relationship to the functional organization of the nucleus.
    J Cell Biol. 1991 Dec;115(5):1191-202 PMID: 1720123
  16. Intranuclear distribution of poly(A) RNA determined by electron microscope in situ hybridization.
    Exp Cell Res. 1993 Sep;208(1):19-34 PMID: 7689476
  17. The NSR1 gene encodes a protein that specifically binds nuclear localization sequences and has two RNA recognition motifs.
    J Cell Biol. 1991 Apr;113(1):1-12 PMID: 1706724
  18. In vivo analysis of the stability and transport of nuclear poly(A)+ RNA.
    J Cell Biol. 1994 Aug;126(4):877-99 PMID: 7519622
  19. Nuclear export of different classes of RNA is mediated by specific factors.
    J Cell Biol. 1994 Mar;124(5):627-35 PMID: 7509815
  20. The yeast RNA1 gene product necessary for RNA processing is located in the cytosol and apparently excluded from the nucleus.
    J Cell Biol. 1990 Aug;111(2):309-21 PMID: 2116418
  21. The nuclear GTPase cycle: promoting peripheralization?
    Trends Cell Biol. 1995 Jan;5(1):5-8 PMID: 14731422
  22. Nuclear mRNA accumulation causes nucleolar fragmentation in yeast mtr2 mutant.
    Mol Biol Cell. 1994 Nov;5(11):1253-63 PMID: 7865887
  23. The HIV-1 Rev trans-activator shuttles between the nucleus and the cytoplasm.
    Genes Dev. 1994 Jul 1;8(13):1538-47 PMID: 7958838
  24. Unequal meiotic recombination within tandem arrays of yeast ribosomal DNA genes.
    Cell. 1980 Mar;19(3):765-74 PMID: 6988084
  25. Effects of actinomycin D analogs on nucleolar phosphoprotein B23 (37,000 daltons/pI 5.1).
    Biochem Pharmacol. 1985 Nov 15;34(22):4059-63 PMID: 2415133
  26. Nucleolar structure.
    Int Rev Cytol. 1984;87:107-58 PMID: 6201455
  27. Regulation of RNA processing and transport by a nuclear guanine nucleotide release protein and members of the Ras superfamily.
    EMBO J. 1993 Jul;12(7):2929-37 PMID: 7687541
  28. Basic local alignment search tool.
    J Mol Biol. 1990 Oct 5;215(3):403-10 PMID: 2231712
  29. The NUF1 gene encodes an essential coiled-coil related protein that is a potential component of the yeast nucleoskeleton.
    J Cell Biol. 1992 Mar;116(6):1319-32 PMID: 1541631
  30. Mutations that alter both localization and production of a yeast nuclear protein.
    Genes Dev. 1988 Jun;2(6):707-17 PMID: 3138162
  31. Isolation and characterization of RAT1: an essential gene of Saccharomyces cerevisiae required for the efficient nucleocytoplasmic trafficking of mRNA.
    Genes Dev. 1992 Jul;6(7):1173-89 PMID: 1628825
  32. Nucleolar targeting signal of human T-cell leukemia virus type I rex-encoded protein is essential for cytoplasmic accumulation of unspliced viral mRNA.
    Proc Natl Acad Sci U S A. 1989 Dec;86(24):9798-802 PMID: 2602375
  33. Nucleolar function of the dense crescent in the yeast nucleus. A biochemical and ultrastructural study.
    Exp Cell Res. 1973 Aug;80(2):313-21 PMID: 4745379
  34. Major nucleolar proteins shuttle between nucleus and cytoplasm.
    Cell. 1989 Feb 10;56(3):379-90 PMID: 2914325
  35. Cloning genes by complementation in yeast.
    Methods Enzymol. 1991;194:195-230 PMID: 2005788
  36. Nucleolar localization of myc transcripts.
    Mol Cell Biol. 1993 Jun;13(6):3221-30 PMID: 7684491
  37. mRNA transport in yeast: time to reinvestigate the functions of the nucleolus.
    Mol Biol Cell. 1995 Apr;6(4):357-70 PMID: 7626803
  38. Structural basis for the regulation of splicing of a yeast messenger RNA.
    Cell. 1991 May 31;65(5):797-804 PMID: 2040015
  39. Structural alterations of the nucleolus in mutants of Saccharomyces cerevisiae defective in RNA polymerase I.
    Mol Cell Biol. 1993 Apr;13(4):2441-55 PMID: 8455621
  40. Identification and characterization of a yeast nucleolar protein that is similar to a rat liver nucleolar protein.
    J Cell Biol. 1988 Jul;107(1):17-31 PMID: 3292539
  41. Yeast phosphatidylethanolamine methylation pathway. Cloning and characterization of two distinct methyltransferase genes.
    J Biol Chem. 1987 Nov 15;262(32):15428-35 PMID: 2445736
  42. RPA190, the gene coding for the largest subunit of yeast RNA polymerase A.
    J Biol Chem. 1988 Feb 25;263(6):2830-9 PMID: 2830265
Article Info
Journal
Molecular biology of the cell
Abbr.
Mol Biol Cell
ISSN
1059-1524
Published
1995-09-00
Pages
1103-10
Language
English
Region
United States
NLM ID
9201390
PMCID
PMC301270
Subset
IM
Grants
NIDDK NIH HHS · DK-27651 · United States
NIGMS NIH HHS · GM-46569 · United States
Databases
GENBANK
S80548
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]