Home LiteratureArticle Details
PMID: 10880460 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Covalent modifier NEDD8 is essential for SCF ubiquitin-ligase in fission yeast.

The EMBO journal ·Vol. 19 ·No. 13 ·2000-07-03 ·Pages 3475-84

Osaka F, Saeki M, Katayama S, Aida N, Toh-E A, Kominami K, Toda T, Suzuki T, Chiba T, Tanaka K, Kato S

Abstract

A ubiquitin-like modifier, NEDD8, is covalently attached to cullin-family proteins, but its physiological role is poorly understood. Here we report that the NEDD8-modifying pathway is essential for cell viability and function of Pcu1 (cullin-1 orthologue) in fission yeast. Pcu1 assembled on SCF ubiquitin-ligase was completely modified by NEDD8. Pcu1(K713R) defective for NEDD8 conjugation lost the ability to complement lethality due to pcu1 deletion. Forced expression of Pcu1(K713R) or depletion of NEDD8 in cells resulted in impaired cell proliferation and marked stabilization of the cyclin-dependent kinase inhibitor Rum1, which is a substrate of the SCF complex. Based on these findings, we propose that covalent modification of cullin-1 by the NEDD8 system plays an essential role in the function of SCF in fission yeast.

MeSH Terms
Amino Acid Sequence Molecular Sequence Data Peptide Synthases/metabolism SKP Cullin F-Box Protein Ligases Schizosaccharomyces/enzymology Sequence Homology, Amino Acid Ubiquitins/chemistry,metabolism
Chemicals
Ubiquitins SKP Cullin F-Box Protein Ligases Peptide Synthases
Authors & Affiliations
11 authors, click to expand affiliations / ORCID
Osaka F
Kato Cytoprotein Network Project, ERATO, Japan Science and Technology Corporation (JST), c/o Sagami Chemical Research Center, Nishi-Ohnuma 4-4-1, Sagamihara, Kanagawa 229-0012, Department of Biological Sciences, Graduate School of Scienc.
Saeki M
Katayama S
Aida N
Toh-E A
Kominami K
Toda T
Suzuki T
Chiba T
Tanaka K
Kato S
References (61)
61 references, click to expand
  1. Identification of the von Hippel-lindau tumor-suppressor protein as part of an active E3 ubiquitin ligase complex.
    Proc Natl Acad Sci U S A. 1999 Oct 26;96(22):12436-41 PMID: 10535940
  2. The ubiquitin-related protein RUB1 and auxin response in Arabidopsis.
    Science. 1998 Jun 12;280(5370):1760-3 PMID: 9624055
  3. Interaction between ubiquitin-protein ligase SCFSKP2 and E2F-1 underlies the regulation of E2F-1 degradation.
    Nat Cell Biol. 1999 May;1(1):14-9 PMID: 10559858
  4. SKP2 is required for ubiquitin-mediated degradation of the CDK inhibitor p27.
    Nat Cell Biol. 1999 Aug;1(4):193-9 PMID: 10559916
  5. Modes of regulation of ubiquitin-mediated protein degradation.
    J Cell Physiol. 2000 Jan;182(1):1-11 PMID: 10567911
  6. The Rbx1 subunit of SCF and VHL E3 ubiquitin ligase activates Rub1 modification of cullins Cdc53 and Cul2.
    Genes Dev. 1999 Nov 15;13(22):2928-33 PMID: 10579999
  7. The von Hippel-Lindau tumor suppressor gene product promotes, but is not essential for, NEDD8 conjugation to cullin-2.
    J Biol Chem. 1999 Dec 10;274(50):36025-9 PMID: 10585493
  8. Covalent modification of all members of human cullin family proteins by NEDD8.
    Oncogene. 1999 Nov 18;18(48):6829-34 PMID: 10597293
  9. SCF and Cullin/Ring H2-based ubiquitin ligases.
    Annu Rev Cell Dev Biol. 1999;15:435-67 PMID: 10611969
  10. Homodimer of two F-box proteins betaTrCP1 or betaTrCP2 binds to IkappaBalpha for signal-dependent ubiquitination.
    J Biol Chem. 2000 Jan 28;275(4):2877-84 PMID: 10644755
  11. Nedd8 modification of cul-1 activates SCF(beta(TrCP))-dependent ubiquitination of IkappaBalpha.
    Mol Cell Biol. 2000 Apr;20(7):2326-33 PMID: 10713156
  12. The amyloid precursor protein-binding protein APP-BP1 drives the cell cycle through the S-M checkpoint and causes apoptosis in neurons.
    J Biol Chem. 2000 Mar 24;275(12):8929-35 PMID: 10722740
  13. A Nedd8 conjugation pathway is essential for proteolytic targeting of p27Kip1 by ubiquitination.
    Proc Natl Acad Sci U S A. 2000 Apr 25;97(9):4579-84 PMID: 10781063
  14. The 26S proteasome: a molecular machine designed for controlled proteolysis.
    Annu Rev Biochem. 1999;68:1015-68 PMID: 10872471
  15. nmt1 of fission yeast. A highly transcribed gene completely repressed by thiamine.
    J Biol Chem. 1990 Jul 5;265(19):10857-64 PMID: 2358444
  16. Molecular genetic analysis of fission yeast Schizosaccharomyces pombe.
    Methods Enzymol. 1991;194:795-823 PMID: 2005825
  17. The ts41 mutation in Chinese hamster cells leads to successive S phases in the absence of intervening G2, M, and G1.
    Cell. 1992 Nov 13;71(4):599-611 PMID: 1423617
  18. Arabidopsis auxin-resistance gene AXR1 encodes a protein related to ubiquitin-activating enzyme E1.
    Nature. 1993 Jul 8;364(6433):161-4 PMID: 8321287
  19. Cloning of a cDNA which encodes a novel ubiquitin-like protein.
    Biochem Biophys Res Commun. 1993 Aug 31;195(1):393-9 PMID: 8395831
  20. Regulation of progression through the G1 phase of the cell cycle by the rum1+ gene.
    Nature. 1994 Jan 20;367(6460):236-42 PMID: 8121488
  21. p25rum1 orders S phase and mitosis by acting as an inhibitor of the p34cdc2 mitotic kinase.
    Cell. 1995 Dec 15;83(6):1001-9 PMID: 8521500
  22. B-type cyclins regulate G1 progression in fission yeast in opposition to the p25rum1 cdk inhibitor.
    EMBO J. 1996 Feb 15;15(4):839-49 PMID: 8631305
  23. Structure and functions of the 20S and 26S proteasomes.
    Annu Rev Biochem. 1996;65:801-47 PMID: 8811196
  24. Ubiquitin-dependent protein degradation.
    Annu Rev Genet. 1996;30:405-39 PMID: 8982460
  25. Fission yeast WD-repeat protein pop1 regulates genome ploidy through ubiquitin-proteasome-mediated degradation of the CDK inhibitor Rum1 and the S-phase initiator Cdc18.
    Genes Dev. 1997 Jun 15;11(12):1548-60 PMID: 9203581
  26. Grr1 of Saccharomyces cerevisiae is connected to the ubiquitin proteolysis machinery through Skp1: coupling glucose sensing to gene expression and the cell cycle.
    EMBO J. 1997 Sep 15;16(18):5629-38 PMID: 9312022
  27. F-box proteins are receptors that recruit phosphorylated substrates to the SCF ubiquitin-ligase complex.
    Cell. 1997 Oct 17;91(2):209-19 PMID: 9346238
  28. A complex of Cdc4p, Skp1p, and Cdc53p/cullin catalyzes ubiquitination of the phosphorylated CDK inhibitor Sic1p.
    Cell. 1997 Oct 17;91(2):221-30 PMID: 9346239
  29. Regulation of the G1 phase of the cell cycle by periodic stabilization and degradation of the p25rum1 CDK inhibitor.
    EMBO J. 1998 Jan 15;17(2):482-97 PMID: 9430640
  30. The TIR1 protein of Arabidopsis functions in auxin response and is related to human SKP2 and yeast grr1p.
    Genes Dev. 1998 Jan 15;12(2):198-207 PMID: 9436980
  31. Combinatorial control in ubiquitin-dependent proteolysis: don't Skp the F-box hypothesis.
    Trends Genet. 1998 Jun;14(6):236-43 PMID: 9635407
  32. sud1(+) targets cyclin-dependent kinase-phosphorylated Cdc18 and Rum1 proteins for degradation and stops unwanted diploidization in fission yeast.
    Proc Natl Acad Sci U S A. 1998 Jul 7;95(14):8159-64 PMID: 9653157
  33. A new NEDD8-ligating system for cullin-4A.
    Genes Dev. 1998 Aug 1;12(15):2263-8 PMID: 9694792
  34. The ubiquitin system.
    Annu Rev Biochem. 1998;67:425-79 PMID: 9759494
  35. Identification of the receptor component of the IkappaBalpha-ubiquitin ligase.
    Nature. 1998 Dec 10;396(6711):590-4 PMID: 9859996
  36. Two F-box/WD-repeat proteins Pop1 and Pop2 form hetero- and homo-complexes together with cullin-1 in the fission yeast SCF (Skp1-Cullin-1-F-box) ubiquitin ligase.
    Genes Cells. 1998 Nov;3(11):721-35 PMID: 9990507
  37. The SCFbeta-TRCP-ubiquitin ligase complex associates specifically with phosphorylated destruction motifs in IkappaBalpha and beta-catenin and stimulates IkappaBalpha ubiquitination in vitro.
    Genes Dev. 1999 Feb 1;13(3):270-83 PMID: 9990852
  38. IkappaBalpha ubiquitination is catalyzed by an SCF-like complex containing Skp1, cullin-1, and two F-box/WD40-repeat proteins, betaTrCP1 and betaTrCP2.
    Biochem Biophys Res Commun. 1999 Mar 5;256(1):127-32 PMID: 10066435
  39. A ubiquitin ligase complex essential for the NF-kappaB, Wnt/Wingless, and Hedgehog signaling pathways.
    Genes Dev. 1999 Mar 1;13(5):505-10 PMID: 10072378
  40. Identification of NEDD8-conjugation site in human cullin-2.
    Biochem Biophys Res Commun. 1999 Apr 2;257(1):100-5 PMID: 10092517
  41. Identification of the activating and conjugating enzymes of the NEDD8 conjugation pathway.
    J Biol Chem. 1999 Apr 23;274(17):12036-42 PMID: 10207026
  42. Rbx1, a component of the VHL tumor suppressor complex and SCF ubiquitin ligase.
    Science. 1999 Apr 23;284(5414):657-61 PMID: 10213691
  43. Reconstitution of G1 cyclin ubiquitination with complexes containing SCFGrr1 and Rbx1.
    Science. 1999 Apr 23;284(5414):662-5 PMID: 10213692
  44. An F-box protein, FWD1, mediates ubiquitin-dependent proteolysis of beta-catenin.
    EMBO J. 1999 May 4;18(9):2401-10 PMID: 10228155
  45. Recruitment of a ROC1-CUL1 ubiquitin ligase by Skp1 and HOS to catalyze the ubiquitination of I kappa B alpha.
    Mol Cell. 1999 Apr;3(4):527-33 PMID: 10230406
  46. ROC1, a homolog of APC11, represents a family of cullin partners with an associated ubiquitin ligase activity.
    Mol Cell. 1999 Apr;3(4):535-41 PMID: 10230407
  47. Conjugation of the ubiquitin-like protein NEDD8 to cullin-2 is linked to von Hippel-Lindau tumor suppressor function.
    Proc Natl Acad Sci U S A. 1999 May 11;96(10):5510-5 PMID: 10318914
  48. p27(Kip1) ubiquitination and degradation is regulated by the SCF(Skp2) complex through phosphorylated Thr187 in p27.
    Curr Biol. 1999 Jun 17;9(12):661-4 PMID: 10375532
  49. Cdc53/cullin and the essential Hrt1 RING-H2 subunit of SCF define a ubiquitin ligase module that activates the E2 enzyme Cdc34.
    Genes Dev. 1999 Jun 15;13(12):1614-26 PMID: 10385629
  50. Identification of an SCF ubiquitin-ligase complex required for auxin response in Arabidopsis thaliana.
    Genes Dev. 1999 Jul 1;13(13):1678-91 PMID: 10398681
  51. The proteasome.
    Annu Rev Biophys Biomol Struct. 1999;28:295-317 PMID: 10410804
  52. The von Hippel-Lindau tumor suppressor protein is a component of an E3 ubiquitin-protein ligase activity.
    Genes Dev. 1999 Jul 15;13(14):1822-33 PMID: 10421634
  53. Components of an SCF ubiquitin ligase localize to the centrosome and regulate the centrosome duplication cycle.
    Genes Dev. 1999 Sep 1;13(17):2242-57 PMID: 10485847
  54. Cullin-3 targets cyclin E for ubiquitination and controls S phase in mammalian cells.
    Genes Dev. 1999 Sep 15;13(18):2375-87 PMID: 10500095
  55. The proteasome: paradigm of a self-compartmentalizing protease.
    Cell. 1998 Feb 6;92(3):367-80 PMID: 9476896
  56. The Ste16 WD-repeat protein regulates cell-cycle progression under starvation through the Rum1 protein in Schizosaccharomyces pombe.
    Curr Genet. 1998 Jan;33(1):29-37 PMID: 9472077
  57. Cdc53 is a scaffold protein for multiple Cdc34/Skp1/F-box proteincomplexes that regulate cell division and methionine biosynthesis in yeast.
    Genes Dev. 1998 Mar 1;12(5):692-705 PMID: 9499404
  58. There's the rub: a novel ubiquitin-like modification linked to cell cycle regulation.
    Genes Dev. 1998 Apr 1;12(7):901-7 PMID: 9531529
  59. Modification of yeast Cdc53p by the ubiquitin-related protein rub1p affects function of the SCFCdc4 complex.
    Genes Dev. 1998 Apr 1;12(7):914-26 PMID: 9531531
  60. A novel protein modification pathway related to the ubiquitin system.
    EMBO J. 1998 Apr 15;17(8):2208-14 PMID: 9545234
  61. Skipping into the E2F1-destruction pathway.
    Nat Cell Biol. 1999 May;1(1):E5-7 PMID: 10559870
Article Info
Journal
The EMBO journal
Abbr.
EMBO J
ISSN
0261-4189
Published
2000-07-03
Pages
3475-84
Language
English
Region
England
NLM ID
8208664
PMCID
PMC313942
Subset
IM
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]