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PMID: 9585415 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Analysis of the Saccharomyces spindle pole by matrix-assisted laser desorption/ionization (MALDI) mass spectrometry.

The Journal of cell biology ·Vol. 141 ·No. 4 ·1998-05-18 ·Pages 967-77

Wigge PA, Jensen ON, Holmes S, Souès S, Mann M, Kilmartin JV

Abstract

A highly enriched spindle pole preparation was prepared from budding yeast and fractionated by SDS gel electrophoresis. Forty-five of the gel bands that appeared enriched in this fraction were analyzed by high-mass accuracy matrix-assisted laser desorption/ ionization (MALDI) peptide mass mapping combined with sequence database searching. This identified twelve of the known spindle pole components and an additional eleven gene products that had not previously been localized to the spindle pole. Immunoelectron microscopy localized eight of these components to different parts of the spindle. One of the gene products, Ndc80p, shows homology to human HEC protein (Chen, Y., D.J. Riley, P-L. Chen, and W-H. Lee. 1997. Mol. Cell Biol. 17:6049-6056) and temperature-sensitive mutants show defects in chromosome segregation. This is the first report of the identification of the components of a large cellular organelle by MALDI peptide mapping alone.

MeSH Terms
Amino Acid Sequence Chromosomes, Fungal/physiology,ultrastructure Cloning, Molecular Cytoskeletal Proteins Databases, Factual Humans Kinetochores Microscopy, Immunoelectron Models, Biological Molecular Sequence Data Mutagenesis, Site-Directed Neoplasm Proteins/chemistry Nuclear Proteins/analysis,biosynthesis,chemistry Peptide Library Peptide Mapping Saccharomyces cerevisiae/physiology,ultrastructure Saccharomyces cerevisiae Proteins Schizosaccharomyces Sequence Alignment Sequence Homology, Amino Acid Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization/methods Spindle Apparatus/physiology,ultrastructure Temperature
Chemicals
Cytoskeletal Proteins NDC80 protein, S cerevisiae NDC80 protein, human Neoplasm Proteins Nuclear Proteins Peptide Library Saccharomyces cerevisiae Proteins
Authors & Affiliations
6 authors, click to expand affiliations / ORCID
Wigge P A
Medical Research Council (MRC) Laboratory of Molecular Biology, Cambridge CB2 2QH, United Kingdom.
Jensen O N
Holmes S
Souès S
Mann M
Kilmartin J V
References (72)
72 references, click to expand
  1. Kinesin-related proteins required for assembly of the mitotic spindle.
    J Cell Biol. 1992 Jul;118(1):95-108 PMID: 1618910
  2. Immunoelectron microscopic localization of phosphoproteins associated with the mitotic spindle.
    J Histochem Cytochem. 1992 Dec;40(12):1837-47 PMID: 1453002
  3. Unravelling the tangled web at the microtubule-organizing center.
    Curr Opin Cell Biol. 1993 Feb;5(1):105-15 PMID: 8448021
  4. NDC10: a gene involved in chromosome segregation in Saccharomyces cerevisiae.
    J Cell Biol. 1993 May;121(3):503-12 PMID: 8486732
  5. Isolation and characterization of a gene (CBF2) specifying a protein component of the budding yeast kinetochore.
    J Cell Biol. 1993 May;121(3):513-9 PMID: 8486733
  6. Comparison of the Saccharomyces cerevisiae G1 cyclins: Cln3 may be an upstream activator of Cln1, Cln2 and other cyclins.
    EMBO J. 1993 May;12(5):1955-68 PMID: 8387915
  7. Identification of essential components of the S. cerevisiae kinetochore.
    Cell. 1993 May 21;73(4):761-74 PMID: 8500169
  8. A simple and efficient method for direct gene deletion in Saccharomyces cerevisiae.
    Nucleic Acids Res. 1993 Jul 11;21(14):3329-30 PMID: 8341614
  9. Mitosis in living budding yeast: anaphase A but no metaphase plate.
    Science. 1997 Jul 25;277(5325):574-8 PMID: 9228009
  10. Kinesin-related KIP3 of Saccharomyces cerevisiae is required for a distinct step in nuclear migration.
    J Cell Biol. 1997 Sep 8;138(5):1023-40 PMID: 9281581
  11. Mitotic spindle positioning in Saccharomyces cerevisiae is accomplished by antagonistically acting microtubule motor proteins.
    J Cell Biol. 1997 Sep 8;138(5):1041-53 PMID: 9281582
  12. Heterologous HIS3 marker and GFP reporter modules for PCR-targeting in Saccharomyces cerevisiae.
    Yeast. 1997 Sep 15;13(11):1065-75 PMID: 9290211
  13. HEC, a novel nuclear protein rich in leucine heptad repeats specifically involved in mitosis.
    Mol Cell Biol. 1997 Oct;17(10):6049-56 PMID: 9315664
  14. Suppressors of the ndc10-2 mutation: a role for the ubiquitin system in Saccharomyces cerevisiae kinetochore function.
    Genetics. 1997 Oct;147(2):409-20 PMID: 9335582
  15. DMC1 functions in a Saccharomyces cerevisiae meiotic pathway that is largely independent of the RAD51 pathway.
    Genetics. 1997 Oct;147(2):533-44 PMID: 9335591
  16. Mal3, the fission yeast homologue of the human APC-interacting protein EB-1 is required for microtubule integrity and the maintenance of cell form.
    J Cell Biol. 1997 Nov 3;139(3):717-28 PMID: 9348288
  17. Interaction with calmodulin is required for the function of Spc110p, an essential component of the yeast spindle pole body.
    EMBO J. 1994 Sep 15;13(18):4329-42 PMID: 7925277
  18. Factors required for the binding of reassembled yeast kinetochores to microtubules in vitro.
    J Cell Biol. 1994 Nov;127(4):995-1008 PMID: 7962081
  19. STU1, a suppressor of a beta-tubulin mutation, encodes a novel and essential component of the yeast mitotic spindle.
    J Cell Biol. 1994 Dec;127(6 Pt 2):1973-84 PMID: 7806575
  20. CEP3 encodes a centromere protein of Saccharomyces cerevisiae.
    J Cell Biol. 1995 Mar;128(5):749-60 PMID: 7876302
  21. The Cdc31p-binding protein Kar1p is a component of the half bridge of the yeast spindle pole body.
    J Cell Biol. 1995 Mar;128(5):863-77 PMID: 7876310
  22. Three-dimensional ultrastructural analysis of the Saccharomyces cerevisiae mitotic spindle.
    J Cell Biol. 1995 Jun;129(6):1601-15 PMID: 7790357
  23. Two novel related yeast nucleoporins Nup170p and Nup157p: complementation with the vertebrate homologue Nup155p and functional interactions with the yeast nuclear pore-membrane protein Pom152p.
    J Cell Biol. 1995 Dec;131(5):1133-48 PMID: 8522578
  24. Automation of micro-preparation and enzymatic cleavage of gel electrophoretically separated proteins.
    FEBS Lett. 1995 Nov 27;376(1-2):91-4 PMID: 8521975
  25. Purification of NSP1 reveals complex formation with 'GLFG' nucleoporins and a novel nuclear pore protein NIC96.
    EMBO J. 1993 Aug;12(8):3061-71 PMID: 7688296
  26. The calcium-binding protein cell division cycle 31 of Saccharomyces cerevisiae is a component of the half bridge of the spindle pole body.
    J Cell Biol. 1993 Oct;123(2):405-16 PMID: 8408222
  27. Assembly and functions of the spindle pole body in budding yeast.
    Trends Genet. 1993 Sep;9(9):300-4 PMID: 8236458
  28. Point mutations that separate the role of Saccharomyces cerevisiae centromere binding factor 1 in chromosome segregation from its role in transcriptional activation.
    Genetics. 1993 Oct;135(2):287-96 PMID: 8243994
  29. A spacer protein in the Saccharomyces cerevisiae spindle poly body whose transcript is cell cycle-regulated.
    J Cell Biol. 1993 Dec;123(5):1175-84 PMID: 7503995
  30. The essential mitotic target of calmodulin is the 110-kilodalton component of the spindle pole body in Saccharomyces cerevisiae.
    Mol Cell Biol. 1993 Dec;13(12):7913-24 PMID: 8247006
  31. Molecular cloning and centrosomal localization of human caltractin.
    Proc Natl Acad Sci U S A. 1993 Dec 1;90(23):11039-43 PMID: 8248209
  32. Pericentrin, a highly conserved centrosome protein involved in microtubule organization.
    Cell. 1994 Feb 25;76(4):639-50 PMID: 8124707
  33. POM152 is an integral protein of the pore membrane domain of the yeast nuclear envelope.
    J Cell Biol. 1994 Apr;125(1):31-42 PMID: 8138573
  34. Cloning of a cDNA encoding human centrin, an EF-hand protein of centrosomes and mitotic spindle poles.
    J Cell Sci. 1994 Jan;107 ( Pt 1):9-16 PMID: 8175926
  35. The 110-kD spindle pole body component of Saccharomyces cerevisiae is a phosphoprotein that is modified in a cell cycle-dependent manner.
    J Cell Biol. 1996 Mar;132(5):903-14 PMID: 8603921
  36. Role of calmodulin and Spc110p interaction in the proper assembly of spindle pole body compenents.
    J Cell Biol. 1996 Apr;133(1):111-24 PMID: 8601600
  37. gamma-Tubulin-like Tub4p of Saccharomyces cerevisiae is associated with the spindle pole body substructures that organize microtubules and is required for mitotic spindle formation.
    J Cell Biol. 1996 Jul;134(2):429-41 PMID: 8707827
  38. Analysis of Tub4p, a yeast gamma-tubulin-like protein: implications for microtubule-organizing center function.
    J Cell Biol. 1996 Jul;134(2):443-54 PMID: 8707828
  39. The spindle pole body component Spc98p interacts with the gamma-tubulin-like Tub4p of Saccharomyces cerevisiae at the sites of microtubule attachment.
    EMBO J. 1996 Aug 1;15(15):3899-911 PMID: 8670895
  40. Mutations which block the binding of calmodulin to Spc110p cause multiple mitotic defects.
    J Cell Sci. 1996 Jun;109 ( Pt 6):1297-310 PMID: 8799819
  41. Pleiotropic nuclear defects associated with a conditional allele of the novel nucleoporin Rat9p/Nup85p.
    Mol Biol Cell. 1996 Jun;7(6):917-34 PMID: 8816998
  42. Molecular characterisation of ninein, a new coiled-coil protein of the centrosome.
    J Cell Sci. 1996 Jan;109 ( Pt 1):179-90 PMID: 8834802
  43. Life with 6000 genes.
    Science. 1996 Oct 25;274(5287):546, 563-7 PMID: 8849441
  44. Spc110p: assembly properties and role in the connection of nuclear microtubules to the yeast spindle pole body.
    EMBO J. 1996 Sep 2;15(17):4592-602 PMID: 8887551
  45. Yeast mutants that produce a novel type of ascus containing asci instead of spores.
    Genetics. 1996 Nov;144(3):979-89 PMID: 8913743
  46. MHP1, an essential gene in Saccharomyces cerevisiae required for microtubule function.
    J Cell Biol. 1996 Dec;135(5):1323-39 PMID: 8947554
  47. Linking genome and proteome by mass spectrometry: large-scale identification of yeast proteins from two dimensional gels.
    Proc Natl Acad Sci U S A. 1996 Dec 10;93(25):14440-5 PMID: 8962070
  48. Mutations that suppress the thermosensitivity of green fluorescent protein.
    Curr Biol. 1996 Dec 1;6(12):1653-63 PMID: 8994830
  49. Centrosome-microtubule nucleation.
    J Cell Sci. 1997 Feb;110 ( Pt 3):295-300 PMID: 9057082
  50. The Saccharomyces cerevisiae kinesin-related motor Kar3p acts at preanaphase spindle poles to limit the number and length of cytoplasmic microtubules.
    J Cell Biol. 1997 Apr 21;137(2):417-31 PMID: 9128252
  51. The spindle pole body component Spc97p interacts with the gamma-tubulin of Saccharomyces cerevisiae and functions in microtubule organization and spindle pole body duplication.
    EMBO J. 1997 Apr 1;16(7):1550-64 PMID: 9130700
  52. The yeast spindle pole body is assembled around a central crystal of Spc42p.
    Cell. 1997 Jun 27;89(7):1077-86 PMID: 9215630
  53. The Drosophila homeotic target gene centrosomin (cnn) encodes a novel centrosomal protein with leucine zippers and maps to a genomic region required for midgut morphogenesis.
    Development. 1995 Nov;121(11):3861-76 PMID: 8582295
  54. A highly divergent gamma-tubulin gene is essential for cell growth and proper microtubule organization in Saccharomyces cerevisiae.
    J Cell Biol. 1995 Dec;131(6 Pt 2):1775-88 PMID: 8557744
  55. A novel complex of nucleoporins, which includes Sec13p and a Sec13p homolog, is essential for normal nuclear pores.
    Cell. 1996 Jan 26;84(2):265-75 PMID: 8565072
  56. Femtomole sequencing of proteins from polyacrylamide gels by nano-electrospray mass spectrometry.
    Nature. 1996 Feb 1;379(6564):466-9 PMID: 8559255
  57. Spc42p: a phosphorylated component of the S. cerevisiae spindle pole body (SPD) with an essential function during SPB duplication.
    J Cell Biol. 1996 Mar;132(5):887-901 PMID: 8603920
  58. Nuf2, a spindle pole body-associated protein required for nuclear division in yeast.
    J Cell Biol. 1994 May;125(4):853-66 PMID: 8188751
  59. Stu2p: A microtubule-binding protein that is an essential component of the yeast spindle pole body.
    J Cell Biol. 1997 Dec 1;139(5):1271-80 PMID: 9382872
  60. BIM1 encodes a microtubule-binding protein in yeast.
    Mol Biol Cell. 1997 Dec;8(12):2677-91 PMID: 9398684
  61. Identification of the components of simple protein mixtures by high-accuracy peptide mass mapping and database searching.
    Anal Chem. 1997 Dec 1;69(23):4741-50 PMID: 9406524
  62. Saccharomyces cerevisiae cells with defective spindle pole body outer plaques accomplish nuclear migration via half-bridge-organized microtubules.
    Mol Biol Cell. 1998 May;9(5):977-91 PMID: 9571234
  63. One-step gene disruption in yeast.
    Methods Enzymol. 1983;101:202-11 PMID: 6310324
  64. Structural rearrangements of tubulin and actin during the cell cycle of the yeast Saccharomyces.
    J Cell Biol. 1984 Mar;98(3):922-33 PMID: 6365930
  65. KAR3, a kinesin-related gene required for yeast nuclear fusion.
    Cell. 1990 Mar 23;60(6):1029-41 PMID: 2138512
  66. The identification of a second cell cycle control on the HO promoter in yeast: cell cycle regulation of SW15 nuclear entry.
    Cell. 1990 Aug 24;62(4):631-47 PMID: 2167175
  67. Components of the yeast spindle and spindle pole body.
    J Cell Biol. 1990 Nov;111(5 Pt 1):1913-27 PMID: 2229181
  68. Basic local alignment search tool.
    J Mol Biol. 1990 Oct 5;215(3):403-10 PMID: 2231712
  69. A 240 kd multisubunit protein complex, CBF3, is a major component of the budding yeast centromere.
    Cell. 1991 Feb 22;64(4):717-25 PMID: 1997204
  70. Asymmetric mitotic segregation of the yeast spindle pole body.
    Cell. 1992 May 1;69(3):505-15 PMID: 1581964
  71. Yeast spindle pole body components.
    Cold Spring Harb Symp Quant Biol. 1991;56:687-92 PMID: 1819516
  72. Two Saccharomyces cerevisiae kinesin-related gene products required for mitotic spindle assembly.
    J Cell Biol. 1992 Jul;118(1):109-20 PMID: 1618897
Article Info
Journal
The Journal of cell biology
Abbr.
J Cell Biol
ISSN
0021-9525
Published
1998-05-18
Pages
967-77
Language
English
Region
United States
NLM ID
0375356
PMCID
PMC2132767
Subset
IM
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